Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017296 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 52884475 ~ 52900125 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017296 | True | 585 | mRNA | 0.61 | 3 | 52884475 | 52900125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017295 | NA | coding | downstream | 3462 | 52868327 ~ 52881013 (-) |
| AMCG00017281 | NA | coding | downstream | 30893 | 52844864 ~ 52853582 (-) |
| AMCG00017285 | NA | coding | downstream | 43831 | 52838503 ~ 52840644 (-) |
| AMCG00017282 | NA | coding | downstream | 63358 | 52818039 ~ 52821117 (-) |
| AMCG00017286 | NA | coding | downstream | 69630 | 52811847 ~ 52814845 (-) |
| AMCG00017294 | NA | coding | upstream | 4215 | 52904340 ~ 52912643 (-) |
| AMCG00017293 | nprl2 | coding | upstream | 12698 | 52912823 ~ 52917944 (-) |
| AMCG00017291 | tmem115 | coding | upstream | 24698 | 52924823 ~ 52929839 (-) |
| AMCG00017298 | NA | coding | upstream | 382340 | 53282465 ~ 53286478 (-) |
| AMCG00017302 | LOC107696462 | coding | upstream | 439381 | 53339506 ~ 53343302 (-) |
| G19604 | NA | non-coding | downstream | 115060 | 52768902 ~ 52769415 (-) |
| G19551 | NA | non-coding | downstream | 193289 | 52679953 ~ 52691186 (-) |
| G19548 | NA | non-coding | downstream | 219293 | 52649008 ~ 52665182 (-) |
| G19516 | NA | non-coding | downstream | 336425 | 52547737 ~ 52548050 (-) |
| G19330 | NA | non-coding | downstream | 1446382 | 51437880 ~ 51438093 (-) |
| G19663 | NA | non-coding | upstream | 109753 | 53009878 ~ 53010218 (-) |
| G19687 | NA | non-coding | upstream | 338081 | 53238206 ~ 53238409 (-) |
| G19741 | NA | non-coding | upstream | 518060 | 53418185 ~ 53419077 (-) |
| G19873 | NA | non-coding | upstream | 953858 | 53853983 ~ 53854628 (-) |
| G19875 | NA | non-coding | upstream | 964785 | 53864910 ~ 53868777 (-) |
| AMCG00017292 | tusc2,LOC108433681,LOC104930950 | other | downstream | 18040 | 52858340 ~ 52866435 (-) |
| AMCG00017251 | actr8 | other | downstream | 1024208 | 51846596 ~ 51860267 (-) |
| G19335 | NA | other | downstream | 1434689 | 51445587 ~ 51449786 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | downstream | 1449236 | 51430687 ~ 51435239 (-) |
| AMCG00017232 | NA | other | downstream | 1672102 | 51184231 ~ 51212373 (-) |
| AMCG00017299 | NA | other | upstream | 294708 | 53194833 ~ 53215336 (-) |
| G19730 | NA | other | upstream | 483215 | 53383340 ~ 53387709 (-) |
| AMCG00017313 | NA | other | upstream | 551993 | 53452118 ~ 53531131 (-) |
| G19808 | NA | other | upstream | 775958 | 53676083 ~ 53728883 (-) |
| G19824 | NA | other | upstream | 862873 | 53762998 ~ 53764376 (-) |
