AMCG00017298


Basic Information

Item Value
gene id AMCG00017298
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53282465 ~ 53286478 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017298
acacacacacacacacacacactgtcacacacactgcaacacacacacactgtcacattgtcactaacacacacacacacacacactctgtcacacacactgcaacacacacacacagtcacacacacacacactgtcacacacactgtcacacacacacactgtcacattgtcactaacacacacacacacacacacacacacacacacactgtcacattgTCACTAACACACCCTAAAAAAATCCGCTTTGGATCCCTGACCTGCAGGAATGACAGGAATggattgttttcccttttcGTCGGAAATTGCAAAAGCAGGAAATTATATAAAGAGATGAGGCAACAGCACAGCGCCACACAAACACCCCGACCTCAGACGTGGATAGGAATGGGAGTGTAATATAAATCTGAAGACCAAAGTGTGCAACAGAAAACGCATCTTCTGTAGAAGGGTTTTAAAAGTTATAACTCAAGTGCACATGACTTTTAAAACGCATTTGTGTCGCTCACACGCAGACACACGGCGAGGAGAACCACAGCGGAGGCTGTGAACCCTGCCTTATCTGttcatttgtataattattaatataaagcCATGCATATCATGTAGACATTCAGCTTGACAGAATAATGCCAGTATACGCACTCTTAGTACCAATGTGTTAGATTGatcacattctgtgtttgttcaaggacaacataACTTTGTGTTAGAATTGGCCAACTTACACCCCAATAGTGTGTCTTTCTAACACAATGATGTGTTTCCCCCACACTCTAAAAGCGAAGGTTCTAGAACCTCTGGGCTCTTCGCGAGTTAAAGCTTCGTGTAAGAACCGCGGGATCATTTGAGAACCATTTCATCATGATCGCAGTTGATTTAAGGTACATTTCAGGTTCTTCAAGGAGCCTTGGTAAAAGGTtcttcctccacagtatcaacccggGAACCCTAAAAGGTTCTTACTAGAACCTTTACATAGAGTGCACATAGACTTGTGTTATTGAGACGCATCATGGTGtaatttgacacattttaacacaaagttgtgttgtccttgaacaaacacagaatgtgatACATTTCACACATTGGGTCTAAGTGTGAATTAGACCGCTCACTTTAAATGCCCCTTCTGTCTGATGGCTCTGTTCTGGCACCATCAAGTATGGTTAAGGTGTCCAGTGTTGCCAGACATTTGGGCGGTTGTTAAGTGACATTTGTGTGTCAGTGGCTGTAGTCcagctgtgtgcgtgtgctttgCCTGTCCAGTAGGTGTCGCTGCAGCCGAGTAAACACAGAGTCCAGGAGCTCAGTCTTCCGGGCTGCGCGGAGATCGCGGCGCTTCTTCTCGCTTTCAGGGCAGATTGAATCCACGGACAGCATGTCTGCAGTGAAGATGAGTGAGGGCCATGTGACGCTGGCGTCGGGGGGGCCACCGCTGTTCTACCGGCAGGCCGAGCCGGGTCAGGGTTCGGCCCGCCTGGCGGTGCTTCTTCTGCACGGCATCCGCTTCTCCTCCGAGAACTGGCTGAACATCCGCACCCTGGAGACGCTGGCAGATGCCAGCTGCCGCGCCGTGGCCATTGACCTGCCAGGATTTGGCAACTCCAAGGATGCCATCGCGCCCGCCCCGGTGGGGGAGCCGGCGCCCGGGAACTTCCTGAAGCAGGTGTCCGAGGCTCTGCAGCTTGGCCCGGCCGTGGTCATCAGCCCGTCTCTGAGCGGCATGTACTCCCTGCCCTTCCTGCTCCAGCACAGCGAGCTGCTCAAGGCCTACATCCCTGTGGCGCCCATCTGCACCGACAAGTTCACCGCCGAGCAGTACGGCAGCGTCCAGACCCCGACACTGATCGTGTACGGCGATCAGGACACCCAGCTGGGGAAGGTGTCCCTCAACAACCTGACGAAGCTGGCCAACCACAAGGTGGTGGTGATGAAGGGCGCGGGCCACGCCTGCTACCTCGACAACCCCGCCGAGTGGCACCGGGCGCTGCTGGAGTTCCTGGGGACGCTGTGACTGCGCACAGCAGCGACGCAGGCACCGGCGAGGGAAGGACGGCCACCCGCCAGCACCCACTAGAATGGGCACTACAATGGATTTGTGAAGCACCCATCGGTTTGATTGTGTTTGATCTTAAGCGATTTCCATCCTAAATAACTTAACTGAGCCACACTGAGGCCAGGAGTCGTGATGTAGCCATCCCAGCCCTAGAGTGGCTCTCTGTGTCAAAGTACCCATGATCCCTTTCTTCAGCCTTGACAGAGAAGTCCAGTTCAGGTCCACCATTGCTTTCCCCCTGGACACCCGAGGGGTCAGAAATGAAGGCTTCACTTACCTTTATGCATGTGTTAAAGTAGGGGTACAGGGGCCTACATGGCAGTACATTTATCACCCAGGCCTTTCAGGCGCTCATCACCATGTGATTTAAAACCCAAATGACACGATTTAAAGCCGAGCCTCACAAACGCTGAGATAAACCTGAATAAGCACTTACTCTTCCAcgattgttgttttaaatgtgatttgtcTCGATGCAacttttgattacatttaatgaataaaCGATGAAGGAACTCA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13706 ABHD14; abhydrolase domain-containing protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017298 True 2584 mRNA 0.51 5 53282465 53286478

Neighbor

gene id symbol gene type direction distance location
AMCG00017291 tmem115 coding downstream 352626 52924823 ~ 52929839 (-)
AMCG00017293 nprl2 coding downstream 364521 52912823 ~ 52917944 (-)
AMCG00017294 NA coding downstream 369822 52904340 ~ 52912643 (-)
AMCG00017296 NA coding downstream 382340 52884475 ~ 52900125 (-)
AMCG00017295 NA coding downstream 401452 52868327 ~ 52881013 (-)
AMCG00017302 LOC107696462 coding upstream 53028 53339506 ~ 53343302 (-)
AMCG00017309 NA coding upstream 106230 53392708 ~ 53396408 (-)
AMCG00017310 NA coding upstream 110142 53396620 ~ 53396829 (-)
AMCG00017312 sema3b coding upstream 249369 53535847 ~ 53557888 (-)
AMCG00017315 LOC105029953,LOC108235233,LOC100697880 coding upstream 326998 53613476 ~ 53626349 (-)
G19687 NA non-coding downstream 44056 53238206 ~ 53238409 (-)
G19663 NA non-coding downstream 272247 53009878 ~ 53010218 (-)
G19604 NA non-coding downstream 513050 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 591279 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 617283 52649008 ~ 52665182 (-)
G19741 NA non-coding upstream 131707 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 567505 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 578432 53864910 ~ 53868777 (-)
G19918 NA non-coding upstream 607858 53894336 ~ 53914876 (-)
G19920 NA non-coding upstream 610346 53896824 ~ 53897452 (-)
AMCG00017299 NA other downstream 67129 53194833 ~ 53215336 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other downstream 416030 52858340 ~ 52866435 (-)
AMCG00017251 actr8 other downstream 1422198 51846596 ~ 51860267 (-)
G19335 NA other downstream 1832679 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1847226 51430687 ~ 51435239 (-)
G19730 NA other upstream 96862 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 165640 53452118 ~ 53531131 (-)
G19808 NA other upstream 389605 53676083 ~ 53728883 (-)
G19824 NA other upstream 476520 53762998 ~ 53764376 (-)
AMCG00017334 NA other upstream 666816 53953294 ~ 53957473 (-)

Expression


Co-expression Network