Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017302 |
| gene name | LOC107696462 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 53339506 ~ 53343302 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein C3orf18 homolog isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017302 | True | 414 | mRNA | 0.64 | 4 | 53339506 | 53343302 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017298 | NA | coding | downstream | 53028 | 53282465 ~ 53286478 (-) |
| AMCG00017291 | tmem115 | coding | downstream | 409667 | 52924823 ~ 52929839 (-) |
| AMCG00017293 | nprl2 | coding | downstream | 421562 | 52912823 ~ 52917944 (-) |
| AMCG00017294 | NA | coding | downstream | 426863 | 52904340 ~ 52912643 (-) |
| AMCG00017296 | NA | coding | downstream | 439381 | 52884475 ~ 52900125 (-) |
| AMCG00017309 | NA | coding | upstream | 49406 | 53392708 ~ 53396408 (-) |
| AMCG00017310 | NA | coding | upstream | 53318 | 53396620 ~ 53396829 (-) |
| AMCG00017312 | sema3b | coding | upstream | 192545 | 53535847 ~ 53557888 (-) |
| AMCG00017315 | LOC105029953,LOC108235233,LOC100697880 | coding | upstream | 270174 | 53613476 ~ 53626349 (-) |
| AMCG00017317 | NA | coding | upstream | 283772 | 53627074 ~ 53632447 (-) |
| G19687 | NA | non-coding | downstream | 101097 | 53238206 ~ 53238409 (-) |
| G19663 | NA | non-coding | downstream | 329288 | 53009878 ~ 53010218 (-) |
| G19604 | NA | non-coding | downstream | 570091 | 52768902 ~ 52769415 (-) |
| G19551 | NA | non-coding | downstream | 648320 | 52679953 ~ 52691186 (-) |
| G19548 | NA | non-coding | downstream | 674324 | 52649008 ~ 52665182 (-) |
| G19741 | NA | non-coding | upstream | 74883 | 53418185 ~ 53419077 (-) |
| G19873 | NA | non-coding | upstream | 510681 | 53853983 ~ 53854628 (-) |
| G19875 | NA | non-coding | upstream | 521608 | 53864910 ~ 53868777 (-) |
| G19918 | NA | non-coding | upstream | 551034 | 53894336 ~ 53914876 (-) |
| G19920 | NA | non-coding | upstream | 553522 | 53896824 ~ 53897452 (-) |
| AMCG00017299 | NA | other | downstream | 124170 | 53194833 ~ 53215336 (-) |
| AMCG00017292 | tusc2,LOC108433681,LOC104930950 | other | downstream | 473071 | 52858340 ~ 52866435 (-) |
| AMCG00017251 | actr8 | other | downstream | 1479239 | 51846596 ~ 51860267 (-) |
| G19335 | NA | other | downstream | 1889720 | 51445587 ~ 51449786 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | downstream | 1904267 | 51430687 ~ 51435239 (-) |
| G19730 | NA | other | upstream | 40038 | 53383340 ~ 53387709 (-) |
| AMCG00017313 | NA | other | upstream | 108816 | 53452118 ~ 53531131 (-) |
| G19808 | NA | other | upstream | 332781 | 53676083 ~ 53728883 (-) |
| G19824 | NA | other | upstream | 419696 | 53762998 ~ 53764376 (-) |
| AMCG00017334 | NA | other | upstream | 609992 | 53953294 ~ 53957473 (-) |
