Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017310 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 53396620 ~ 53396829 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0070925 | organelle assembly | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| GO:0060537 | muscle tissue development | biological_process |
| GO:0014706 | striated muscle tissue development | biological_process |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017310 | True | 210 | mRNA | 0.60 | 1 | 53396620 | 53396829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017309 | NA | coding | downstream | 212 | 53392708 ~ 53396408 (-) |
| AMCG00017302 | LOC107696462 | coding | downstream | 53318 | 53339506 ~ 53343302 (-) |
| AMCG00017298 | NA | coding | downstream | 110142 | 53282465 ~ 53286478 (-) |
| AMCG00017291 | tmem115 | coding | downstream | 466781 | 52924823 ~ 52929839 (-) |
| AMCG00017293 | nprl2 | coding | downstream | 478676 | 52912823 ~ 52917944 (-) |
| AMCG00017312 | sema3b | coding | upstream | 139018 | 53535847 ~ 53557888 (-) |
| AMCG00017315 | LOC105029953,LOC108235233,LOC100697880 | coding | upstream | 216647 | 53613476 ~ 53626349 (-) |
| AMCG00017317 | NA | coding | upstream | 230245 | 53627074 ~ 53632447 (-) |
| AMCG00017318 | NA | coding | upstream | 241733 | 53638562 ~ 53642822 (-) |
| AMCG00017316 | NA | coding | upstream | 264341 | 53661170 ~ 53663458 (-) |
| G19687 | NA | non-coding | downstream | 158211 | 53238206 ~ 53238409 (-) |
| G19663 | NA | non-coding | downstream | 386402 | 53009878 ~ 53010218 (-) |
| G19604 | NA | non-coding | downstream | 627205 | 52768902 ~ 52769415 (-) |
| G19551 | NA | non-coding | downstream | 705434 | 52679953 ~ 52691186 (-) |
| G19548 | NA | non-coding | downstream | 731438 | 52649008 ~ 52665182 (-) |
| G19741 | NA | non-coding | upstream | 21356 | 53418185 ~ 53419077 (-) |
| G19873 | NA | non-coding | upstream | 457154 | 53853983 ~ 53854628 (-) |
| G19875 | NA | non-coding | upstream | 468081 | 53864910 ~ 53868777 (-) |
| G19918 | NA | non-coding | upstream | 497507 | 53894336 ~ 53914876 (-) |
| G19920 | NA | non-coding | upstream | 499995 | 53896824 ~ 53897452 (-) |
| G19730 | NA | other | downstream | 8911 | 53383340 ~ 53387709 (-) |
| AMCG00017299 | NA | other | downstream | 181284 | 53194833 ~ 53215336 (-) |
| AMCG00017292 | tusc2,LOC108433681,LOC104930950 | other | downstream | 530185 | 52858340 ~ 52866435 (-) |
| AMCG00017251 | actr8 | other | downstream | 1536353 | 51846596 ~ 51860267 (-) |
| G19335 | NA | other | downstream | 1946834 | 51445587 ~ 51449786 (-) |
| AMCG00017313 | NA | other | upstream | 55289 | 53452118 ~ 53531131 (-) |
| G19808 | NA | other | upstream | 279254 | 53676083 ~ 53728883 (-) |
| G19824 | NA | other | upstream | 366169 | 53762998 ~ 53764376 (-) |
| AMCG00017334 | NA | other | upstream | 556465 | 53953294 ~ 53957473 (-) |
| G19950 | NA | other | upstream | 635810 | 54032639 ~ 54034161 (-) |
