AMCG00017313


Basic Information

Item Value
gene id AMCG00017313
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53452118 ~ 53531131 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017313
ATGAGCAAGATCATCGTCTATGATCGAGCTGACTACCAGGGGGTCAGCAGAGAGTTCACTTCTGACGTCCCCAACCTAAGAGACGTCAACTTAGATAACTGCATCTGCAAGGTGATTGGGCAGCCCTGGGTGCTGTATAAAGACCCCGACTATCAAGGACAACAGTGGATCTTTGAGGAAGGAGACTATGCCAGTATAGATGCATATGACACCATCTCTTCCCTGCAGCTGGTGACCGAGGACCTGTCAGACCCTCAGATCATGCTAAGCATCGTCCTCACCTGCGAGACCAACCTGAGCTACGGATCCTTCAATGACACGGTGTCCTCCCACAAGGTGCAGAGAGGAGCCTGGGTCCTGTATCAACATCCAGACAGAGGTGGGTGGCAGATGGTTGTGAGAGCTGGTCAAGACAGTCCTCATTGCAGTTGGTTCGATGACCGGCTGTCCCACCTGCGCCCTTTGAAGCCAGGGAGGCCGACTGTGACAGCGGAGATCCTGTGGGACAAGAAGGAGGAGCAGACAAGGTCCATCACCATCGACTCCATCTGCAGCTGTAACCACAAGTATGAGGGCACGGTCACCGAGACCTTCAACTTCAGCAACTCCACTCAGATAACTGTGGGAACGACTTTCTCCGTAGACGTGTTCAAGGTGAAGACCGAATTCAGCGTTTCTGTGAGCAACACCTTCACTGTGGAAAAGGGAAGCAGCAACACCAAGACCGAGAGGAAGAAGGTCCAGGTCAGCCTGCCAGCCAAAGTCCCTCTGCACACCAAGCTCACTGTGAAGGTGCTGAGGGAGGAGGTGGAAGTGAACATGCCAGTCCAGCTGACTGTCACTCTGGGGGGGCGCAGTAAAACACAGTACGGGGAGTACAGGTGCCAGtctgcgctctctctctgtgctgagTACAGGGAAAGAAGCTGTAGATCAGAGCAGAAAGGCAGGAtgaggaaggagagagatgaACCACTCTGGAACCATAgcaggcagacacacGTGTCAGGACACAAGCGTGAGGCTCACACCAGCCAAGTGGGGCAGAAAGCCACCTGCGCCGCGCTGCACCGAGAGACCTACAGTCAGACCCGTCTTTCAAACAGAACCGAGCCAGCCCGAACCCACAATCCTGGCAAAGTCCTGGTGTCGCCAAAATGCAACTCCTTAAAAATCATAATCCGCCTCCCGGGGGCCGGGGAGACAAACGGCAGTGCTGTCCCTCCTGCCCTCCGGCACACAGGGGGCTCCACTCCACAAGGGAGACGCGATCCTGAAGTAAATACTGTTTCTAGTAAGAAGAGGAactgtctctccttctcctcctccttcgcTGCGCCCAGTAAAGACACAGTGACGCAGTGA
>TU24529
tctcacgcacaaACCAAAGCCATTACGTCACtcagttttttcagttttatttattattgtgttaattTACACCACACTCCTCCACAGTGACTCAAAGATTACAGTGCACCCCGTGAACTTTGACCTTCGACCTTTAATCACCGTGAACCCCCAGTCCTGGCCCTCACCCAGGCTACCCGAACCCCTAGCGGTTTATACACCCCGGCTGTGCTGACAGGCCGCGCTGCACCGAGAGACCTACAGTCAGACCCGTCTTTCAAACAGAACCGAGCCAGCCCGAACCCACAATCCTGGCAAAGTCCTGGTGTCGCCAAAATGCAACTCCTTAAAAATCATAATCCGCCTCCCGGGGGCCGGGGAGACAAACGGCAGTGCTGTCCCTCCTGCCCTCCGGCACACAGGGGGCTCCACTCCACAAGGGAGACGCGATCCTGAAGTGTGCGGTCACGCTCCTGACACCTGCAACTTCACAGCCATCCTGCCTTCTGCCGCCCACagcctcaacacacacacacacacactcacacacctacacactctctcacacactctcacacacactcacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017313 True 1365 mRNA 0.55 6 53524642 53531131
TU24529 False 581 lncRNA 0.55 2 53452118 53527652

Neighbor

gene id symbol gene type direction distance location
AMCG00017310 NA coding downstream 55289 53396620 ~ 53396829 (-)
AMCG00017309 NA coding downstream 55710 53392708 ~ 53396408 (-)
AMCG00017302 LOC107696462 coding downstream 108816 53339506 ~ 53343302 (-)
AMCG00017298 NA coding downstream 165640 53282465 ~ 53286478 (-)
AMCG00017291 tmem115 coding downstream 522279 52924823 ~ 52929839 (-)
AMCG00017312 sema3b coding upstream 4716 53535847 ~ 53557888 (-)
AMCG00017315 LOC105029953,LOC108235233,LOC100697880 coding upstream 82345 53613476 ~ 53626349 (-)
AMCG00017317 NA coding upstream 95943 53627074 ~ 53632447 (-)
AMCG00017318 NA coding upstream 107431 53638562 ~ 53642822 (-)
AMCG00017316 NA coding upstream 130039 53661170 ~ 53663458 (-)
G19741 NA non-coding downstream 33041 53418185 ~ 53419077 (-)
G19687 NA non-coding downstream 213709 53238206 ~ 53238409 (-)
G19663 NA non-coding downstream 441900 53009878 ~ 53010218 (-)
G19604 NA non-coding downstream 682703 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 760932 52679953 ~ 52691186 (-)
G19873 NA non-coding upstream 322852 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 333779 53864910 ~ 53868777 (-)
G19918 NA non-coding upstream 363205 53894336 ~ 53914876 (-)
G19920 NA non-coding upstream 365693 53896824 ~ 53897452 (-)
G19923 NA non-coding upstream 373164 53904295 ~ 54041033 (-)
G19730 NA other downstream 64409 53383340 ~ 53387709 (-)
AMCG00017299 NA other downstream 236782 53194833 ~ 53215336 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other downstream 585683 52858340 ~ 52866435 (-)
AMCG00017251 actr8 other downstream 1591851 51846596 ~ 51860267 (-)
G19335 NA other downstream 2002332 51445587 ~ 51449786 (-)
G19808 NA other upstream 144952 53676083 ~ 53728883 (-)
G19824 NA other upstream 231867 53762998 ~ 53764376 (-)
AMCG00017334 NA other upstream 422163 53953294 ~ 53957473 (-)
G19950 NA other upstream 501508 54032639 ~ 54034161 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other upstream 586133 54117264 ~ 54154094 (-)

Expression


Co-expression Network