AMCG00017320


Basic Information

Item Value
gene id AMCG00017320
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53711335 ~ 53715554 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017320
ATGCACCTGCCACAGGCTGCTGCTTCCTCCTCAGGCATGGCCTACGCCCTGCTGGCCTCAGTGCCCCCCGTGTTCGGGCTGTACTCCTCCTTCTACCCCGTCCTGGTCTACTTCATCTTTGGGACATCCCGGCACATCTCCATAGGTGAGCAGCACCTGACAGCGCGCCGCCCCGAGCAAACAGCCCCAGTGGAGCCCCCTACCTGCCCACTACTCATTCATGTGTATTGCACCTTTGCGGTGATCAGTCTCATGGTGGGCAGTGTGACTGAGCGCCTCGCTCCCAATGAGAACTTCCTCCGCAACGACACCAATGGCACTGAGGTTCTGGACCTGACCGCCAGGGACACCTACAGGGTCCAGGTTGCCGCGGCGGTCACGATCCTAGCGGGGATATTCCAGgtggtGCTGGGTCTGGTGCAGTTCGGCTTCGTGGTGACCTACCTATCCAACCCGCTGGTCAGGGGCTACACCACCGGTGCCGCGGTCAATGCTGTCATCTCCCAGCTCAAGTATATCTTCGGCCTCCACCCCCGGCGCCACAGCGGCCCTCTTTCTCTGGCCTATGTGAGTAACGGAACACTGATAGATGTGTGCTGGCTGCTGCCCCAGACCAATCTGGGCACTCTGGTGGTCAGTGTGGTGTCCCTGGTGGCTCTGATCGCAGCGAAGGAGCTCAACtgtctcccagctctgAAATGCGAGACCTCCCTGCTGCGCTGGTCCTCTCTCAGCACTCAGGACCAGGACGCGCTCGGGAGCTAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017320 True 765 mRNA 0.61 6 53711335 53715554

Neighbor

gene id symbol gene type direction distance location
AMCG00017316 NA coding downstream 47877 53661170 ~ 53663458 (-)
AMCG00017318 NA coding downstream 68513 53638562 ~ 53642822 (-)
AMCG00017317 NA coding downstream 78888 53627074 ~ 53632447 (-)
AMCG00017315 LOC105029953,LOC108235233,LOC100697880 coding downstream 84986 53613476 ~ 53626349 (-)
AMCG00017312 sema3b coding downstream 153447 53535847 ~ 53557888 (-)
AMCG00017321 NA coding upstream 21852 53737406 ~ 53781148 (-)
AMCG00017322 NA coding upstream 67272 53782826 ~ 53783724 (-)
AMCG00017329 NA coding upstream 110004 53825558 ~ 53827875 (-)
AMCG00017328 NA coding upstream 120096 53835650 ~ 53851974 (-)
AMCG00017327 NA coding upstream 141542 53857096 ~ 53864544 (-)
G19741 NA non-coding downstream 292258 53418185 ~ 53419077 (-)
G19687 NA non-coding downstream 472926 53238206 ~ 53238409 (-)
G19663 NA non-coding downstream 701117 53009878 ~ 53010218 (-)
G19604 NA non-coding downstream 941920 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 1020149 52679953 ~ 52691186 (-)
G19873 NA non-coding upstream 138429 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 149356 53864910 ~ 53868777 (-)
G19918 NA non-coding upstream 178782 53894336 ~ 53914876 (-)
G19920 NA non-coding upstream 181270 53896824 ~ 53897452 (-)
G19923 NA non-coding upstream 188741 53904295 ~ 54041033 (-)
AMCG00017313 NA other downstream 180204 53452118 ~ 53531131 (-)
G19730 NA other downstream 323626 53383340 ~ 53387709 (-)
AMCG00017299 NA other downstream 495999 53194833 ~ 53215336 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other downstream 844900 52858340 ~ 52866435 (-)
AMCG00017251 actr8 other downstream 1851068 51846596 ~ 51860267 (-)
G19824 NA other upstream 47444 53762998 ~ 53764376 (-)
AMCG00017334 NA other upstream 237740 53953294 ~ 53957473 (-)
G19950 NA other upstream 317085 54032639 ~ 54034161 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other upstream 401710 54117264 ~ 54154094 (-)
AMCG00017343 NA other upstream 412133 54127687 ~ 54145216 (-)

Expression


Co-expression Network