AMCG00017351


Basic Information

Item Value
gene id AMCG00017351
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54360009 ~ 54366128 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017351
actcacactcacacactcacacacacacactcacacacagccctCCTTGACCTGTTTGTGGACAGGTGGTGACGTGAGGTGAAGAAAATCGGCTCAGTTACTTGATGACGGTGTCCCTTCcattgtctgtgtctgtgtggggggaGTGGAGGTGTGTTTACCCTCCCATCAAATCTGATCCTGCTTTTCCTTAACAGCTGACAGCCTGAACTGCACTGCCTGGCTGAAGGGAGACAGACAGCCCTAAGATACACAGACATGATTGACAGCCCTGTGCTACACAGACAGACCTTGACAGACCTTTAGTACTTTACCAGCAGttaacacagacagacacacagactagTGTGGGTTCACAGACAATCAGAgacataacaaacacacacacacacacagacacacacgcatacatacgcacacgcacacgcacacacagacaggctgaAGGATGAGAGAGGGGGCTCTGGGCTGGAGCGCTTGGGGACCCTGAAGACAGAGCCCGACTCCATGGAGGCTGCAGACCAGAGCGAGGCGCAGAGgctggtggagagagagagtgagggaggagaggaggaggaagacaaggggggagacagggagagcaGCCCATCCAAGACACATTGCGCGCCCCCTGGTGAGTCTCGAGTGCGGCGCAGTGTGGGCTCTCTGCCCACCATCAACCCAGACAGGCTGAGGAACGCCAAGATACTGGTGGAGAGAGCAGTGAAGTGTAAGAAGGTGTTCTCAGTGCTGGGCCCATACCCCGTGATCAGGGCGTCTCTGCGCGCCCGGGGGTGGGTGGAGCGCCGCatgccccgccccgccccgcctGGTCCGGCACGCCGTCGCGGAGAtggggaggcagaggaggacGACGGGGATAGCGACAGTGACGACGGAGACGAGGGTGAGGAAGAGCACCTGCACTGGACTGCCCGACCCGCTGACTGACTGACGACGTATCTGATAGGACTGActtttctctcgctctcctcctcTCAGATGACAGCCcagaggagggggagaaggaggaCGACCCAGACGGGGTCTATGACCTCATGTCTCGTCTGGTGCGCAACGAGACGCCGTATTTCTACTGGACGACGCGGAGGGACGCGATTGACTGCCGCTCGCTGCGGAAGGAGCAGATGATCAATCACTATGGGAAGGCAGGCTCATTCACCACCAAGgtGGGACTGTGTGTAAACCTGAGGAATCTGCGCTGGTTCGATGAGGCCGACCCAGACACCTTCTTCCCGCGGTGCTACAGGCTGGGCGCCAGGGACGAGAAACACACCTTCATCGAGGATTTCCGTCGGACTGCGTGCTGCAGTGTGCTGAAGTGTGTGGTGGAGCCCAGCGCTGCGTCGGGGATGGAGGGGGGACGTGAGGGCAGCCCGGGAGACCCCCCAGGCCAGGCTCAGAAGAAGGCGTGTAAGCGTCGAGCCCCCCCACTGGTCGGCTCCCAGGTGATTGACATGGCTCTGCGCGTGTGCGAGGACTTCCTGGCCAGCCTGGAGCACCGCGACATCGACGTCTCCGCCGAGGCGGCCCCCGTCATCTCCGAGCAGCAGTGGGACGAGTTCATCCAGAGCTATTACCAGGTCGTGCACGAGGGGGCAGAGATCGAGGGCAGGGGTCAGTACAGAGCGCACTGCCTGGCTGTGCTGCAGCGCCTCAGGGCGGTCAGTCCACAACTGGACATCGACGGCATCCACAACATCTGGATCATCAAACCCGGGGCCAAGTCCCGTGGCCGGGGCATCGTGTGCCTGCGGCGGCTGGACGAGATCTTGCGGCTGGTGGACGGTGACCCCACCCTGATCAAGGACAGCAAGTGGGTGGTGCAGAAGTACCTGGAGCGCCCCCTGCTGCTCCACGGCACCAAGTTCGACCTGCGCCACTCTGTCCACCTGTGCAACAACTCCATCCAGAAGCACCTGAGCCCCTCGGCCCGGCGCCACCCCGGCCTCCCCGCCGACAACATCTGGGCGGGAGAGCAGCTGCGCTCTCACCTGCGTGCCCGGGGCCTCGGGGGGCAGTGGGAGCAGCGGGCGGAGCCGGGCATGAGGCGGGCCGTGGTGCGTGCCCTGCTGACCGCCCAGGACCTGGTGGAGCCGCGGCGGTCCAGCTTCGAGCTCTATGGCGCCGACTTCATGCTGGGGCCCGACCTGCAGCCCTGGCTGCTGGAGATCAACGCCAGCCCCACCATGGCCCCCTCCACCGCGGTCACCGCCCGGCTGTGCCTGGCCGGGCCGGTGAGGAAGCAGGCAGGACCGCGCCCCTCCCCGCCGCCCAAGCCCCCGCCGCCCGGCCACGCCTCCCTCCCCGGCACCGAGCTGGCGCAGCCACAGCAGGAGGGCAAGGAGAACCAGAacaagagaggaggaggaggaggtaaGAGGGAAGTGAGAGCTCACCCAGCACccaggaaagagagagggagtgggagaagCAGAggccgaggaggaggagggcgggGGGCAGCTATTGTCAGGCAGTACACCTTCTCCTCCAGCAGAGCCTCTGCCCCAGCCCCCGGCCCCGCCCCCAGTGCCACGCCCCGCCGGCCCAGGCGTCTGGGGCTGAAGTTCACCAGCTTTGACGCACTGGAGCTGCGTACGGTGAAACAGCCGCGCGTCAGCCCCCTCCCTCACTCTGTGTCCACGGCTCCCTGGAAGAGCGCCCCCTACTGCTATCGCCCCTCCCACTCCAACGCCCCTCCGCCCCCAGCAAACCCTGGACCCCTCTCCCTGCCCACCCTGCGGCCCCCCGTGCTCCCCCTCGAGGTCATCAGCCTCCAGCTGGGCCCTGCACTCCTCCCCGGGCCCCCCCCGCGGCCCCCCAGGCCCCAGCCCGCCGCTCACCGGGGGCCCCGGCTACAGGACCTGCCCGGCCTCAAGAGACAGCTGATAGTGGCCGTGCTGTCTGCCTCCAGCAAAACTGtctga

Function

GO: NA

KEGG:

id description
K16608 TTLL3_8; tubulin monoglycylase TTLL3/8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017351 True 2951 mRNA 0.65 11 54360009 54366128

Neighbor

gene id symbol gene type direction distance location
AMCG00017350 ARPC4,arpc4,LOC103385929,LOC107094019,LOC107753787 coding upstream 2020 54352706 ~ 54357989 (+)
AMCG00017354 NA coding upstream 16962 54335940 ~ 54343047 (+)
AMCG00017349 rab7a,rab7,LOC108254780,LOC106518505,LOC105017315,LOC107093905 coding upstream 24998 54325336 ~ 54335011 (+)
AMCG00017347 NA coding upstream 151288 54205132 ~ 54208721 (+)
AMCG00017340 NA coding upstream 189499 54153607 ~ 54170510 (+)
AMCG00017348 NA coding downstream 608 54366736 ~ 54372123 (+)
AMCG00017356 NA coding downstream 23204 54389332 ~ 54422632 (+)
AMCG00017355 NA coding downstream 95781 54461909 ~ 54469135 (+)
AMCG00017361 LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004 coding downstream 127449 54493577 ~ 54495259 (+)
AMCG00017363 NA coding downstream 264510 54630638 ~ 54632572 (+)
G20028 NA non-coding upstream 14232 54343402 ~ 54345777 (+)
G20006 NA non-coding upstream 188586 54171215 ~ 54171423 (+)
G19958 NA non-coding upstream 302089 54056860 ~ 54057920 (+)
G19899 NA non-coding upstream 318976 53948758 ~ 54041033 (+)
G20086 NA non-coding downstream 186012 54552140 ~ 54555325 (+)
G20136 NA non-coding downstream 249113 54615241 ~ 54615448 (+)
G20177 NA non-coding downstream 366892 54733020 ~ 54737869 (+)
G20218 NA non-coding downstream 429368 54795496 ~ 54797145 (+)
G19961 NA other upstream 293822 54064358 ~ 54066187 (+)
G19956 NA other upstream 304834 54054800 ~ 54055175 (+)
G19896 NA other upstream 412391 53939537 ~ 53947618 (+)
AMCG00017331 NA other upstream 423527 53915125 ~ 53936482 (+)
G19860 NA other upstream 495291 53864108 ~ 53864718 (+)
AMCG00017357 NA other downstream 57425 54423553 ~ 54452054 (+)
G20099 NA other downstream 161624 54527752 ~ 54529204 (+)
G20085 NA other downstream 207346 54573474 ~ 54582399 (+)
G20156 NA other downstream 297183 54663311 ~ 54664526 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other downstream 442338 54808466 ~ 54809106 (+)

Expression


Co-expression Network