AMCG00017360 (prkar2aa,LOC103384990,LOC107669629,LOC107717523,LOC107556498,LOC105906428)


Basic Information

Item Value
gene id AMCG00017360
gene name prkar2aa,LOC103384990,LOC107669629,LOC107717523,LOC107556498,LOC105906428
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54555357 ~ 54558595 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017360
ATGTGTTCCTCTGATTTAACACCccccccctcttctctctctcccacagctCCCCCCATCAGCAGATTTAATCGGAGAGTGTCAGTGTGTGCTGAGGCCTTTAACCCTgacgaggaggaggacgacACGGAGCCGCGGGTCGTTCACCCCAAAACAGATGAGCAGCGCTGCCGCCTGCAGGAGGCCTGTCGTGACATCCTGCTTTTCAAAACTCTGGACCAGGAGCAGATGTCCCAGGTCCTTGATGCCATGTTTGAGCACCGAGTCCAGGCGAAGGACCATGTCATCAACCAGGGGGACGACGGGGACAACTTCTATGTCATagagaggggggTGTTTGACATCGTGGTGGAGCGGGGGGGACAGGCCCTGTGTGTGGGGAAGTACGATAACAAGGGCAGCTTTGGTGAACTGGCGCTGATGTACAACACCCCCCGCGCTGCCACCATCATCGCCACCAATGAGGGGGCGCTGTGGGGCCTGGACCGTGTGACCTTCCGGCGACTGGTACTGAAGAACAACGCCAAGAAGAGGAAGATGTACGAGATCTTCATAGAGTCCGTGCCTCTGCTCAAGTCCCTGGAGCTGTCTGAGAGGATGAAGATTGTCGATGTCATAGGAGTGAAGATGTACCACGACGGGGAGCGCATCATCACACAGGGTGACAAAGCTGACTGTTTCTACATCGTGGAGTCGGGGGAGGTGAGGATAATGATGAAGAGCAAGacaaAGGCGGCGCAACAGGACAACTCAGAGGTCGAGATTGCTCGGTGCACCCGGGGGCAGTATTTTGGGGAGCTGGCCCTTGTCACCAACAAGCCTCGTTTctaa

Function

symbol description
prkar2aa Predicted to enable cAMP binding activity; cAMP-dependent protein kinase inhibitor activity; and protein kinase A catalytic subunit binding activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within phosphorylation and regulation of protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be part of cAMP-dependent protein kinase complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human PRKAR2A (protein kinase cAMP-dependent type II regulatory subunit alpha).

NR:

description
protein kinase, cAMP-dependent, regulatory, type II, alpha A

GO:

id name namespace
GO:0045859 regulation of protein kinase activity biological_process
GO:0005952 cAMP-dependent protein kinase complex cellular_component
GO:0005515 protein binding molecular_function
GO:0008603 cAMP-dependent protein kinase regulator activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K04739 PRKAR; cAMP-dependent protein kinase regulator

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017360 True 831 mRNA 0.57 9 54555357 54558595

Neighbor

gene id symbol gene type direction distance location
AMCG00017353 NA coding downstream 202778 54343401 ~ 54352579 (-)
AMCG00017352 LOC100305111 coding downstream 231904 54317093 ~ 54323453 (-)
AMCG00017346 LOC106583208,LOC106565550 coding downstream 279018 54264090 ~ 54276339 (-)
AMCG00017342 ruvbl1,LOC107721190,LOC107667375,LOC107568195 coding downstream 403509 54147224 ~ 54151848 (-)
AMCG00017344 NA coding downstream 439073 54107703 ~ 54116284 (-)
AMCG00017362 prkar2aa,LOC108265715,LOC107679546,LOC107591783,LOC107711958,LOC105906428 coding upstream 11676 54570271 ~ 54570558 (-)
AMCG00017359 slc25a20 coding upstream 13830 54572425 ~ 54578093 (-)
AMCG00017365 arih2,LOC102785176 coding upstream 21475 54580070 ~ 54587525 (-)
AMCG00017368 NA coding upstream 30464 54589059 ~ 54595357 (-)
AMCG00017367 qars,LOC107675620,LOC107693419 coding upstream 96240 54654835 ~ 54661911 (-)
G20118 NA non-coding downstream 44869 54510236 ~ 54510488 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding downstream 57319 54494935 ~ 54498038 (-)
G20078 NA non-coding downstream 101081 54452621 ~ 54454276 (-)
G20066 NA non-coding downstream 184691 54369752 ~ 54370666 (-)
G19992 NA non-coding downstream 497430 54056885 ~ 54057927 (-)
G20122 NA non-coding upstream 20670 54579265 ~ 54579718 (-)
G20131 NA non-coding upstream 48768 54607363 ~ 54607614 (-)
G20137 NA non-coding upstream 56651 54615246 ~ 54615450 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other downstream 19814 54527784 ~ 54535543 (-)
G20064 NA other downstream 187341 54366784 ~ 54368016 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other downstream 401263 54117264 ~ 54154094 (-)
AMCG00017343 NA other downstream 410141 54127687 ~ 54145216 (-)
G19950 NA other downstream 521196 54032639 ~ 54034161 (-)
AMCG00017366 LOC105899076 other upstream 79828 54638423 ~ 54651864 (-)
G20193 pfkfb4,LOC104938990,LOC103365889,LOC106565814,LOC107718206,LOC108435436,LOC108254777 other upstream 141975 54700570 ~ 54723791 (-)
G20237 NA other upstream 278502 54837097 ~ 54838491 (-)

Expression


Co-expression Network