AMCG00017361 (LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004)


Basic Information

Item Value
gene id AMCG00017361
gene name LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54493577 ~ 54495259 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017361
ATGGAGACCGACGGCTACAGCGAGCTCCTGGAGACGACGGACGGCGCCGGGGGCGGGTGGGGTGGGGGCCTGGGCGGTGGCGGGGATGGGTCCGAGCCGGGCTGGTACCTCCCGTACCCGGTCAGCTTCCAGGTGTCGCTCACCAGCTTCCTCATGCTGGAGCTGGTGCTGGGCTTCAGCAGCAACCTCACCGTGCTGGTGCTGTACTGCGCCCAGTCCAACTTGGTGGACTCAGTCAGCAACATGGTGACGGTCAACCTGCATGTGCTGGACATCATCGTGTGCGTGCTGTGTGTCCCGCTCACCATCGTCATCATCCTGCTGCCCCTGGAGCGCGACATCGCCCTGGTGTGCTGCTTCCACGAGGCCTGCGTCACCTTCACCAGCATTGCCACGGCCGTCAACGTCCTGGTCATCAGCATGGACCGCTACGACATCTCGGTGAGGCCAGCCAACCGCGTGCTGACCCCGCGTCGCGCCGGGGCCCTACTGGCCGCTGTGTGGGGCGTGTCCCTGGCCGTCTTCTTCATCCCCTTCCTGGAGGTGGAGCTGTTTGGCGGGGCCGGGGCAGAGGACGCCGAGGACGGGGGGTGGGATGGCGCACTGGCCGAGGACAGGTTGTCCGGCCCCGAGCGGGCGGAGCCAGAGCCAGGAAGCGACGCAGACTCCGCCCCCGCGCCCGCCCCCTCTCCCGGCAGTGTGGCCTGGCGCAACCGGACGCTGCtctgtgtgggggggcagggctACCACACCGGGCTGGGCATGTACTACCACCTACTCATCCAGGTGCCCATCTTCTTCCTGGCCGTGGTGGTCATGCTAGTCACCTACTCGCGCATCCTGCAGGCGCTCAACATTCGCATCGGCTCGCACTTCAAGAGGAGCCAGCGGCGCCGGGGCTCAGGTTGCGGGGGCAAGAAGCGACgcaagaagaagaagggggCCGGTGGGGGAGGCGTGGTgctggggggcgggggcgggggctCCTCCAGCGACACCAAGCGGCTCTCCCAGCCCCCGCTCATCCCCACGCCATCCCCTACCCCCACCTCGCCACTGCCCCCGCCCCTCCCGGCCAGCGCCGCGACCCCGCCGCACCCCGCCCCGCCGCCCACGCCCCTGTCACCCACGCCCCTGTCGCCCCAGGTCCCGGCGGTGTCAGGGGGGGGCGGGGCGCTGGGGGCCGGGCTGGGCGAGGGCGGGGTGGcggcagcggcggcggcggccatGGGGGTGCAGGCCTCGGTGTCGGCCATCATCGCCCTGCGCCGGGCCGTGCGGCGGCACCGCGACCGACGGGAGCGCCAGCGCCGGGTCTTCAAGATGTCCCTGGTCATCATCTCCACCTTCCTGGGCTGCTGGGCGCCCATCTCTGTGGTCAATGTGCTCATCCTGTGCCTGGGCCCCAGTGACCAGCTGGTCAAGCTGCGCATCTGCTTCCTGGCCATGGCCTACGGCACGACCATCTTCCACCCGCTGCTCTACGCCTTCACCCGGCAGAAGCTGCGCAAGGTGCTGAAGACCAAGGTGAAGAAGAGGGTGGTGTCCCTGCTGCAGGTGGACCCCGCGCCCAGCGGCACCGTCATCCACAACTCCTGGGTGGAACCGCGCAAGGGCCGCAAGGTCCGTCTGGAGTGCAGCGACGCCACGGACCGCTGCCTGACCGAGGCGGTGCGGGAGTGA

Function

NR:

description
probable G-protein coupled receptor 22

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017361 True 1683 mRNA 0.70 1 54493577 54495259

Neighbor

gene id symbol gene type direction distance location
AMCG00017355 NA coding upstream 24442 54461909 ~ 54469135 (+)
AMCG00017356 NA coding upstream 70945 54389332 ~ 54422632 (+)
AMCG00017348 NA coding upstream 121454 54366736 ~ 54372123 (+)
AMCG00017351 NA coding upstream 127449 54360009 ~ 54366128 (+)
AMCG00017350 ARPC4,arpc4,LOC103385929,LOC107094019,LOC107753787 coding upstream 135588 54352706 ~ 54357989 (+)
AMCG00017363 NA coding downstream 135379 54630638 ~ 54632572 (+)
AMCG00017364 NA coding downstream 171621 54666880 ~ 54673342 (+)
AMCG00017383 NA coding downstream 193664 54688923 ~ 54690827 (+)
AMCG00017370 NA coding downstream 325877 54821136 ~ 54826385 (+)
AMCG00017382 NA coding downstream 341478 54836737 ~ 54837616 (+)
G20028 NA non-coding upstream 147800 54343402 ~ 54345777 (+)
G20006 NA non-coding upstream 322154 54171215 ~ 54171423 (+)
G19958 NA non-coding upstream 435657 54056860 ~ 54057920 (+)
G19899 NA non-coding upstream 452544 53948758 ~ 54041033 (+)
G20086 NA non-coding downstream 56881 54552140 ~ 54555325 (+)
G20136 NA non-coding downstream 119982 54615241 ~ 54615448 (+)
G20177 NA non-coding downstream 237761 54733020 ~ 54737869 (+)
G20218 NA non-coding downstream 300237 54795496 ~ 54797145 (+)
AMCG00017357 NA other upstream 41523 54423553 ~ 54452054 (+)
G20013 NA other upstream 100986 54307795 ~ 54392591 (+)
G19961 NA other upstream 427390 54064358 ~ 54066187 (+)
G19956 NA other upstream 438402 54054800 ~ 54055175 (+)
G19896 NA other upstream 545959 53939537 ~ 53947618 (+)
G20099 NA other downstream 32493 54527752 ~ 54529204 (+)
G20085 NA other downstream 78215 54573474 ~ 54582399 (+)
G20156 NA other downstream 168052 54663311 ~ 54664526 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other downstream 313207 54808466 ~ 54809106 (+)
AMCG00017369 ssr4,LOC107671948,LOC107737640,LOC108425558,LOC107560913 other downstream 347681 54842940 ~ 54846281 (+)

Expression


Co-expression Network