AMCG00017362 (prkar2aa,LOC108265715,LOC107679546,LOC107591783,LOC107711958,LOC105906428)


Basic Information

Item Value
gene id AMCG00017362
gene name prkar2aa,LOC108265715,LOC107679546,LOC107591783,LOC107711958,LOC105906428
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54570271 ~ 54570558 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017362
ATGAGTATCGAAATACCCGCCGGCCTGACGGAGCTGCTGCAGGGCTACACCGTGGAGGTGCTCCGCCAGCGGCCGCCCGACCTGGTCGAGTTCGCCGTGCAGTATTTCACTCGGCTGCGGGAGAGCCGGAGCCAGGACGGCGCCAAGGCGGGCCCGGGCGGCGCGGTGAAGGCCCCCGTCAAAGGAGTGGTGTTCGACGGGGAGCCCATGCAGACCGAGTCCAATGGAGacgagggggaggaggaggacgacgaCGAGGACGACGACTCCGACTTCGAACGTGAGTAA

Function

symbol description
prkar2aa Predicted to enable cAMP binding activity; cAMP-dependent protein kinase inhibitor activity; and protein kinase A catalytic subunit binding activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within phosphorylation and regulation of protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be part of cAMP-dependent protein kinase complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human PRKAR2A (protein kinase cAMP-dependent type II regulatory subunit alpha).

NR:

description
PREDICTED: cAMP-dependent protein kinase type II-alpha regulatory subunit-like

GO:

id name namespace
GO:0001932 regulation of protein phosphorylation biological_process
GO:0005952 cAMP-dependent protein kinase complex cellular_component
GO:0005515 protein binding molecular_function
GO:0008603 cAMP-dependent protein kinase regulator activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017362 True 288 mRNA 0.67 1 54570271 54570558

Neighbor

gene id symbol gene type direction distance location
AMCG00017360 prkar2aa,LOC103384990,LOC107669629,LOC107717523,LOC107556498,LOC105906428 coding downstream 11676 54555357 ~ 54558595 (-)
AMCG00017353 NA coding downstream 217692 54343401 ~ 54352579 (-)
AMCG00017352 LOC100305111 coding downstream 246818 54317093 ~ 54323453 (-)
AMCG00017346 LOC106583208,LOC106565550 coding downstream 293932 54264090 ~ 54276339 (-)
AMCG00017342 ruvbl1,LOC107721190,LOC107667375,LOC107568195 coding downstream 418423 54147224 ~ 54151848 (-)
AMCG00017359 slc25a20 coding upstream 1867 54572425 ~ 54578093 (-)
AMCG00017365 arih2,LOC102785176 coding upstream 9512 54580070 ~ 54587525 (-)
AMCG00017368 NA coding upstream 18501 54589059 ~ 54595357 (-)
AMCG00017367 qars,LOC107675620,LOC107693419 coding upstream 84277 54654835 ~ 54661911 (-)
AMCG00017379 NA coding upstream 123326 54693884 ~ 54701627 (-)
G20118 NA non-coding downstream 59783 54510236 ~ 54510488 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding downstream 72233 54494935 ~ 54498038 (-)
G20078 NA non-coding downstream 115995 54452621 ~ 54454276 (-)
G20066 NA non-coding downstream 199605 54369752 ~ 54370666 (-)
G19992 NA non-coding downstream 512344 54056885 ~ 54057927 (-)
G20122 NA non-coding upstream 8707 54579265 ~ 54579718 (-)
G20131 NA non-coding upstream 36805 54607363 ~ 54607614 (-)
G20137 NA non-coding upstream 44688 54615246 ~ 54615450 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other downstream 34728 54527784 ~ 54535543 (-)
G20064 NA other downstream 202255 54366784 ~ 54368016 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other downstream 416177 54117264 ~ 54154094 (-)
AMCG00017343 NA other downstream 425055 54127687 ~ 54145216 (-)
G19950 NA other downstream 536110 54032639 ~ 54034161 (-)
AMCG00017366 LOC105899076 other upstream 67865 54638423 ~ 54651864 (-)
G20193 pfkfb4,LOC104938990,LOC103365889,LOC106565814,LOC107718206,LOC108435436,LOC108254777 other upstream 130012 54700570 ~ 54723791 (-)
G20237 NA other upstream 266539 54837097 ~ 54838491 (-)

Expression


Co-expression Network