AMCG00017370


Basic Information

Item Value
gene id AMCG00017370
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54821136 ~ 54826385 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017370
GCACGCAAGACAGCACGCAAGACAGCACGCCACCGCTAACCCAGTACGCGAGTCTGCGGATTTGGACGCAGTCCTGGCCTGGATCGCAGACGAGAAGAAAACTGACGAATTGAATGTCGCCGGGTAATGAAAACCTCAGAAGACTACGATTGCTAAAGGAAATGAGCGCTTGTTCTTCCGGGTCACTGTAGACAGTCCACAGGAAGTGTCGCGCTAGGGGGTGGACATTAAAGCGGATTTTCCCAGCCGTGCGGTTGGATCAGTTCTGCTGCCTGCGCCAACCCGAgCTCTGACTGACAGCTGCCCCGGCCAATGGGGGCCTTCGGCAGGATGTGCGCCCGCCTGGGACACGCCCTCTCTCCACAGAAGATCTGGGGACTTAGCCTTGCCAGGGGGCTCTGCGACCATGGTGGGGCAGGGGGGGCGGTGTGCTGTCCCCCCCTGCCCTCTGTGGGACGACCCACAGTGGAGGGGTGCGTGGCGCTCTGGGAGGGGCTGTTCCACGAGAGGGGGGTCCCTGAGCCACGACTGTCCAGCGAATACATCATTGCACACATCCTGGGAGCCAAGACTCTGGCGAGCCTGGGCTCGGACAGACGCACAGAGCTGCTGACAGACGCACAGACGCGGCGGGTGTGGGAGCTGTGTGCCAAGCGCCTGCGGAGGATGCCTGTGCAGTACGAGCTGGTGGGGCTGGTGCTGACGGACCTGCGGGCTGGCGGTGGGGGGGACAGCCCACGGGTGCTGGAGGTGGGCTGTGGCTCCGGGGCAGTCGCTCTCAGCCTGCTGCACGGCCTGCCACAGgccagTGTGGTGGCCATGGACAGGAGCAGTGAGGCCATCTCTCTGACCAGGGCAAACGCACTCATgcTGGGGCTGCAGGATCGGCTGGAGGTGCTGCAGCTGGACGTGTCTCTGGACATGGCAACCCTGGAGCCCGAGATCCTGAGgaaGCTGTATCTGGAGGTAGAGCCCCGGCAGCCGGCGCTGGTGCAGCAGGCTGTGAGCGAGGGGCAGGAGGCGGGACTGCGGTACAGCGCCACCCACACGGACCTCTATGGCAGACCTCGGTTCTGTGTTTTGCAGAGAATCTAATACTGAGACTGGCAGAACCCAGGGCCCAGCCACCCAGCGacacacagcccagcccagttCTCCCACTGGGGATGAATTCTGCACTTTTTGTGACATTTCCTCTACTGGGATCCACAGCGTCTGTTCCAGGTCACGCCTGCATGGACAGAGctcttattgtgtgtgtataagtgtgtgtgtgttttctacaTGATCCGTGGTGCTGCGGTCCCTCCAGGCTGCAGAAGCAGATCAGATGCTTTTGTAAGACAGTGTTTACCCGTGAAGTAAA

Function

GO: NA

KEGG:

id description
K02493 hemK, prmC, HEMK; release factor glutamine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017370 True 1366 mRNA 0.61 10 54821136 54826385

Neighbor

gene id symbol gene type direction distance location
AMCG00017383 NA coding upstream 130309 54688923 ~ 54690827 (+)
AMCG00017364 NA coding upstream 147794 54666880 ~ 54673342 (+)
AMCG00017363 NA coding upstream 188564 54630638 ~ 54632572 (+)
AMCG00017361 LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004 coding upstream 325877 54493577 ~ 54495259 (+)
AMCG00017355 NA coding upstream 352001 54461909 ~ 54469135 (+)
AMCG00017382 NA coding downstream 10352 54836737 ~ 54837616 (+)
AMCG00017371 wdr82,swd2,LOC107712117,LOC106565976,LOC107584451,LOC107673495 coding downstream 30441 54856826 ~ 54863910 (+)
G20218 NA non-coding upstream 23991 54795496 ~ 54797145 (+)
G20177 NA non-coding upstream 83267 54733020 ~ 54737869 (+)
G20136 NA non-coding upstream 205688 54615241 ~ 54615448 (+)
G20086 NA non-coding upstream 265811 54552140 ~ 54555325 (+)
G20028 NA non-coding upstream 475359 54343402 ~ 54345777 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other upstream 12030 54808466 ~ 54809106 (+)
G20156 NA other upstream 156610 54663311 ~ 54664526 (+)
G20085 NA other upstream 238737 54573474 ~ 54582399 (+)
G20099 NA other upstream 291932 54527752 ~ 54529204 (+)
AMCG00017357 NA other upstream 369082 54423553 ~ 54452054 (+)
AMCG00017369 ssr4,LOC107671948,LOC107737640,LOC108425558,LOC107560913 other downstream 16555 54842940 ~ 54846281 (+)

Expression


Co-expression Network