AMCG00017375


Basic Information

Item Value
gene id AMCG00017375
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54725605 ~ 54729120 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017375
ATGGAGCTGCTGAGAAATGTTGTCATGATGGACTCCCCGGCCTCCCGCCTGGGCTCCACTGTCTGCCCGCCGATGGTCCGGGCGCACAGCGTGGGCTCCTCCGGCGGCCGGATGGTCAGGAGGCGCCTGCGCCTTAACAAGAACGACATCGGCTCCCCCACCAACTTCCAGCACCTGAGCCACATCGCCTGGCACGCCGAGACGGGCTTCGATGTCGACGTGGACAACCTGGACCCGGCGCTGGTCGAGCTGTTTGTGAAGGCCGGGATCCGCAAGACGGACCTGCAGGACCAGCGCACGTCGCAGGCCATCTTCCACATCATCCAGAGCCAAGGGGGGCTGGAGGCCGTGCGCAAGGAGGTGCACAGCACAGGCGCCCCGCCCCAGACCCTGCAGAAGTCCTCCTGTGGCCCCCCCTCGCCGGCAGCCCTCAAGCGCCCTGGCCGCCCCCTCCTGCGCAGCTACAGCGCCCAGGCCCTCCCGCTGCCCCAGCAGCCCTGCCATGCCACGCTCTTCCCTCCCCTGCTGGacatccctccccctccctccatccctgcccccccgcccccctcattccggcctcctccccctccccccgcccCTCGAGCTCCCCCAGCCGCCCCAGGTGACCCCACAGCTCGGGCACCTTCGGCTGCTCCCGCACCCCCAGCAGCACCGTCCGCTCCACTGACACCTCCGGCAACACCCCCAGGTCTGCCCTCTACCCCCCAGCCCCCACCGGAGGCCACCGCTGCTGCTGACCCCCAATTTACAGGGCTGGGGATACGCTGCTTGATGGACCAGATCAGACACGGGGTCTCGCTCAAAACGGTGTCGATGATGCAGGCCCGTGACCTCGCCCCCCCCCCGGTGGAGCCCTTGAGCATCGTGGCGGCTCTGCGGGACGTCATGCAGAAACGCTACAGCGCCATGAACCCCACAGAGGACCTGGCTGAGTCGGAGGAGGATTCGGATGGTGCCGAGTGGTGCTGACCGCGAGACGGGCAGGACCGGGCGCTGGGCCTCAGACGCACACAGCTGGGCACCTGTGCTCTGCACCTGGggagattttttaaatgtatttatttttgtttttaattgttttgtttgttcttttgctTCCCGTTTGAGCTGTTCTGGGGACTCGCCAATGATGTTCGAACACGGGCTGGACTGTTGGATTTTTGCAGGACCGGTAGTGATTTGGGTTTAGTTCACTGTGTTCTGGGGTTGGGCCGGGCCATCTTCTGTATAGGGTTCTCTTTCATCTCACCTGACTTCTCGCACAATGCAAGTCCCTTGAAATGGCacgtttgtatttaaattagtaaaatataatctgatattagaaattgttattttaaaagatctTTTACTATAAATGTCATTtgggaaaaaatgtaaaccacatGGGTTTGCAAAcccttataaaaataaataaataaaggtgtaTTATATCTCTTCCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017375 True 1469 mRNA 0.60 7 54725605 54729120

Neighbor

gene id symbol gene type direction distance location
AMCG00017380 NA coding downstream 21386 54703947 ~ 54704219 (-)
AMCG00017379 NA coding downstream 23978 54693884 ~ 54701627 (-)
AMCG00017367 qars,LOC107675620,LOC107693419 coding downstream 63694 54654835 ~ 54661911 (-)
AMCG00017368 NA coding downstream 130248 54589059 ~ 54595357 (-)
AMCG00017365 arih2,LOC102785176 coding downstream 138080 54580070 ~ 54587525 (-)
AMCG00017374 mapk3 coding upstream 3954 54733074 ~ 54748372 (-)
AMCG00017373 dnah1 coding upstream 21363 54750483 ~ 54789078 (-)
AMCG00017378 NA coding upstream 62716 54791836 ~ 54794782 (-)
AMCG00017377 LOC107672588 coding upstream 67891 54797011 ~ 54805363 (-)
AMCG00017372 sec61a1,LOC107384934,LOC102228108,LOC106518493,LOC103023094 coding upstream 84773 54813893 ~ 54820175 (-)
G20137 NA non-coding downstream 110155 54615246 ~ 54615450 (-)
G20131 NA non-coding downstream 117991 54607363 ~ 54607614 (-)
G20122 NA non-coding downstream 145887 54579265 ~ 54579718 (-)
G20118 NA non-coding downstream 215117 54510236 ~ 54510488 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding downstream 227567 54494935 ~ 54498038 (-)
G20193 pfkfb4,LOC104938990,LOC103365889,LOC106565814,LOC107718206,LOC108435436,LOC108254777 other downstream 1814 54700570 ~ 54723791 (-)
AMCG00017366 LOC105899076 other downstream 73741 54638423 ~ 54651864 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other downstream 190062 54527784 ~ 54535543 (-)
G20064 NA other downstream 357589 54366784 ~ 54368016 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other downstream 571511 54117264 ~ 54154094 (-)
G20237 NA other upstream 107977 54837097 ~ 54838491 (-)

Expression


Co-expression Network