AMCG00017376


Basic Information

Item Value
gene id AMCG00017376
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54846894 ~ 54853690 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017376
ATGTTTCTGGTCCTCGCAGCCACGCCGCAGCTCCGGGAGTTCCTGGCCCGGGCGAGGGGGGGGGAGGTCCGGCTCATCAAGGTGGTCATCAAGGACGAGCAGTTGGTTCTGGGTGCGCACCGGGAGCCGTCTCGGACCTGGGACCGCGACTATGACACCTTCCTGCTGCCCCTGCTGGACGACCAGGAGCCCTGCTACATCCTGTTCCGTCTCGACTCCCAGAATGCACAGGGCTACGAGTGGCTTTTCATTTCCTGGTCGCCCGACCAGTCTCCGGTCCGGCAGAAGATGCTGTACGCTGCGACCCGTGCCACCGTGAAGAAGGAGTTCGGGGGCGGACACATCAAGGACGAGATGTTCGGCACGCTGCAGGAGGACATCTGCTTCCAGGGCTATCTGCGTCACATGACCTCCTGCTCCGCCCCCGCGCCGCTCACCACCGCCGAGCAGGAGCTGCAGCAAATCAAGATCAACGAGGATGAGCGGCGCAGGGCCAGAGCCCCCCGCGGACACGGCAAGGTGAAGACGGAGATCAGCGTGGAGAGTAAGCACCAGACTCTGCAGGGCCTGGCGTTCCCCCTGCAGGAGGAGGCCAAGCGCGCCCTGCTGCAGCTCCGCCAGAGGAAGATCAACTACGTGCAGCTGCGGTTGGACACGGAGAGGGAGACGATCGAGCTGGTCCACACCAACCCCACAGAGATCGGTGATCTGCCCGGCCACGTGCCCACGGACACGCCACGCTACCACTTCTTCCTGTACCGCCACTCCCACGAGGGGGACTACCTGGAGTCTGTGGtgtttaTCTACTCCATGCCTGGCTACAGCTGCAGTATTAAGGAGCGGATGCTCTACTCCAGCTGCAAGAGCCGCCTGCTGGACGAGGTGGAGCAGACCCTGCACATCGAGGTCGCCAAGAAGatCGAGACGGACAGCGGGGCCGAGCTCACGGCGGAGTTCCTGTACGAGGAGGTGCACCCCAAGCAGCACGCCTTCAAGCAGGCCTTCTCCAAGCCGCGCGGCCCAGCGGGCAAGAGGGGCCACAAGCGACTGATCAGGGGCCCCGGCGAGAACGGGGAGGACAGctagagggagggaaggagagggagagagggcttGGCTGGACTGATTCCATGGCAACCATACCACGTCACGCCCGGACGCGCCCCCCCCGCCTCTCTATTCCTGGTTTCCTTTGCTTTGTCAACgtctcccatctctctctcccagtttctccttctttctcccCTCTATCCTTTTCTCTCCGGGGCTCCACTGTGGTCGTCCTCACCCTCGTTTGGGAAGAGGTCTGCCTTCATCTCGTTCCCCCTTCTGTCGTCTGTCTCTCCTCCACGCAGACGGAGATTCGGCACCTCGCTCTCTGGGAAGGAATCTGTTTTCCTGctgctttcagtttgttttcctttgccccctttttctttttttttttctgtaacgTCTGGATGATCCAGAGTTCTGTTCTCTGAGAGGCCTGGATCTCCCAGAAGCCCCCAAAACGGAAACGATCAGAAGATTTGCTCCTGTCCGTCTCCCCCActctgctctgtctgtctgtgcagcaGGCTGGGCCGTCTGTACGGCTGTGAGTGAGTGTCCAAGTTTGAAGTGCGCCAGCGAGTCGCtgcatctctcacacacagagcgACGGACACGCACTCACTCAGCCCAGACAGCCCAGACCAAACTTCCAAATTAAGAatgatcagaaaaaaacaaacaaacaaaaaagtattttcaatcTTGTgtgtaagataaataaaaataaaaaactcaaaaagctacagcagggtctccatcGCCACTGTGCCGTCGATCCAGGGAGGTCGAGTACGAGTTCCTCTGGGCCTGTA

Function

GO: NA

KEGG:

id description
K08870 TWF; twinfilin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017376 True 1868 mRNA 0.59 9 54846894 54853690

Neighbor

gene id symbol gene type direction distance location
AMCG00017372 sec61a1,LOC107384934,LOC102228108,LOC106518493,LOC103023094 coding downstream 26719 54813893 ~ 54820175 (-)
AMCG00017377 LOC107672588 coding downstream 41531 54797011 ~ 54805363 (-)
AMCG00017378 NA coding downstream 52112 54791836 ~ 54794782 (-)
AMCG00017373 dnah1 coding downstream 57816 54750483 ~ 54789078 (-)
AMCG00017374 mapk3 coding downstream 98522 54733074 ~ 54748372 (-)
G20137 NA non-coding downstream 231444 54615246 ~ 54615450 (-)
G20131 NA non-coding downstream 239280 54607363 ~ 54607614 (-)
G20122 NA non-coding downstream 267176 54579265 ~ 54579718 (-)
G20118 NA non-coding downstream 336406 54510236 ~ 54510488 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding downstream 348856 54494935 ~ 54498038 (-)
G20237 NA other downstream 8403 54837097 ~ 54838491 (-)
G20193 pfkfb4,LOC104938990,LOC103365889,LOC106565814,LOC107718206,LOC108435436,LOC108254777 other downstream 123103 54700570 ~ 54723791 (-)
AMCG00017366 LOC105899076 other downstream 195030 54638423 ~ 54651864 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other downstream 311351 54527784 ~ 54535543 (-)
G20064 NA other downstream 478878 54366784 ~ 54368016 (-)

Expression


Co-expression Network