Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017380 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 54703947 ~ 54704219 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017380 | True | 273 | mRNA | 0.67 | 1 | 54703947 | 54704219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017379 | NA | coding | downstream | 2320 | 54693884 ~ 54701627 (-) |
| AMCG00017367 | qars,LOC107675620,LOC107693419 | coding | downstream | 42036 | 54654835 ~ 54661911 (-) |
| AMCG00017368 | NA | coding | downstream | 108590 | 54589059 ~ 54595357 (-) |
| AMCG00017365 | arih2,LOC102785176 | coding | downstream | 116422 | 54580070 ~ 54587525 (-) |
| AMCG00017359 | slc25a20 | coding | downstream | 125854 | 54572425 ~ 54578093 (-) |
| AMCG00017375 | NA | coding | upstream | 21386 | 54725605 ~ 54729120 (-) |
| AMCG00017374 | mapk3 | coding | upstream | 28855 | 54733074 ~ 54748372 (-) |
| AMCG00017373 | dnah1 | coding | upstream | 46264 | 54750483 ~ 54789078 (-) |
| AMCG00017378 | NA | coding | upstream | 87617 | 54791836 ~ 54794782 (-) |
| AMCG00017377 | LOC107672588 | coding | upstream | 92792 | 54797011 ~ 54805363 (-) |
| G20137 | NA | non-coding | downstream | 88497 | 54615246 ~ 54615450 (-) |
| G20131 | NA | non-coding | downstream | 96333 | 54607363 ~ 54607614 (-) |
| G20122 | NA | non-coding | downstream | 124229 | 54579265 ~ 54579718 (-) |
| G20118 | NA | non-coding | downstream | 193459 | 54510236 ~ 54510488 (-) |
| G20116 | LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 | non-coding | downstream | 205909 | 54494935 ~ 54498038 (-) |
| AMCG00017366 | LOC105899076 | other | downstream | 52083 | 54638423 ~ 54651864 (-) |
| AMCG00017358 | LOC104930492,LOC103358728,LOC105927190 | other | downstream | 168404 | 54527784 ~ 54535543 (-) |
| G20064 | NA | other | downstream | 335931 | 54366784 ~ 54368016 (-) |
| G19998 | eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 | other | downstream | 549853 | 54117264 ~ 54154094 (-) |
| G20237 | NA | other | upstream | 132878 | 54837097 ~ 54838491 (-) |
