AMCG00017383


Basic Information

Item Value
gene id AMCG00017383
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54688923 ~ 54690827 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017383
ATGCCCTCCTCCCCTTCAGCTCCCCCCTGTATGAGGACGGGCGCAGGGGGACCCTGCATGCTGCCCCCCAACCGCACGGCACTGCTGTGGGCTGACCTGCGCCGCACGCTGTCCTTTGCCTGGGAGATGCACGTCTATGGCTCCGCCTCCCTCTTCCTGCTGCTGTCCCTGGGGGGGCtgctggggctgctgctgcccccGCCCCCGGGAGTGTGCGGCACCCCCCGCGGCTGCCTGGCGCTGACCAacaccctgctgctgctggccgGCGCGGTGCGGGCAGCCTATCTGTTCACCGACCCGTACGGCACGCGGGAGCTGCTGACCCAGCCGGCCATGGTGGCGCTGCACAACCTGCCCTTCCCGCTGCTGCTCTGGGCCCTGGCGGCGCTCTGCCTGCTGGCTGTGGAGGCGGCGGGGGTCAGCGTGCTCCCTGCTGGGCTGCAGCGCCCCCCCCTGGCCGCCGTGCTGGCGCTGCTGCACTGCACCGTCCAGACAGCGGCCGACTTCCTGTCCCAGGCGCTGAGCCCCGCGGTGCCGGCTGTGCTGCAGGCACTGTCTGTGGCCTGGGGCTGCAGCCTGTGCGTGGGCTTCCTGTTCTGCGTGTTCCCCCGGCTGCGCTACCGTACCGCACCCCCGGCCCTGGGAGGAGCAGGGGCAAGGGAGGAGGCGGGGGGCTGCGGGGCAGGGGGGCGGCGGCAGCTGCGTGTGCTGGCGCGGGTGCTGTGCGTGTGCGCGGTACTGGGCGCGCTGTGCTGTGGGCTGCAGGTGCAGGCTGCGCTCTGGCTGGCCGGGCTGCTGGGTGACCGGCGCCGCTTCACCTGGGCCTGGTGGCTCGGCCAGTTCTGCGGCCGCCTGCTGGAGCTGGGCTGGGCCTCCTGCATGCTACTGCTGGCGTCTCGGCCCTTCTGGTGCCCGgcacaggagagagggaggagccggggggcaggggaggaggaggaagagggcagggcagggagggcctcctcctcctcttcctcctcgcACACCTGCTGGGCGAAGATCCTACAGTGCGCCCGCGGCCGGCAGCGCCGGAAGGCTGAGAGCAACGGGGTGTCTGGGTCCAATGGAGGGGGAGGGACTGGTTCTGCAGAGCTCCCCAACAACCAGGCGCACCAGGACCGGGCCGGCGCAGACATCAGTAAGAGCCTGATCCGGAACCGGGCGGAGGCACTGCCCCTGCGCAGCCTGAAGGACATCAACAGCAGCGCCGGCCACAGCCAGCAGGGCGGCTCCACAGGCTCCCTGCAGTGGCCAGGGGGGGGCGCCCTACTGCACCGCTCCCTCAGCAGCCTGAGcctggagaaggagaggggcAGGGAGTCTATCTTGTCCCTGACTGATTTTGACCTgcgccccccctcccccatcgaCCTGAGCCGCAGCATCGACGAGGCACTGCACCTGGTGCGAGGCGGCCTGTTCAGCCCCCGTCCGCCACCCTCCCCGCCGCCGTCCCCCCCTACCCGCTCCGTCTCGCCACCCCCCGGCCCCTGCCAGCCACTGCTGTCCCCCGGCGCCCCCCCCACCTGGCCCCGGCGCTCCAGCGAGCCCCAGCTGTGGCGAGAGGGGGAGGTCGGGGGCGCAGAGACGTTGGCAGCGACGCAGGCAGCGGGAGGCGCTCCGCACATACCCCCTCCCGCGGGAGAGGCTGCAGCCGAGCCCCGCATCgtgcccccctccctctcctgtcCCGTGTCGCTCACGGCCTCCCGCTGGCCCCCTCGGCCCCGCCCGCGCCCGCTCCGCACCGGGGACGACACCCTGCCCTTCCTGCCCCGCGAGGAAAGACCAGAGGAGGGTGTCCCCCACAGCCAGGCGAGACGCAGCCACAGGTCCCAGCCCGACTCGGTCAGCGTCTGCAGCGACACCATCGACCTGtga

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017383 True 1905 mRNA 0.73 1 54688923 54690827

Neighbor

gene id symbol gene type direction distance location
AMCG00017364 NA coding upstream 15581 54666880 ~ 54673342 (+)
AMCG00017363 NA coding upstream 56351 54630638 ~ 54632572 (+)
AMCG00017361 LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004 coding upstream 193664 54493577 ~ 54495259 (+)
AMCG00017355 NA coding upstream 219788 54461909 ~ 54469135 (+)
AMCG00017356 NA coding upstream 266291 54389332 ~ 54422632 (+)
AMCG00017370 NA coding downstream 130309 54821136 ~ 54826385 (+)
AMCG00017382 NA coding downstream 145910 54836737 ~ 54837616 (+)
AMCG00017371 wdr82,swd2,LOC107712117,LOC106565976,LOC107584451,LOC107673495 coding downstream 165999 54856826 ~ 54863910 (+)
G20136 NA non-coding upstream 73475 54615241 ~ 54615448 (+)
G20086 NA non-coding upstream 133598 54552140 ~ 54555325 (+)
G20028 NA non-coding upstream 343146 54343402 ~ 54345777 (+)
G20006 NA non-coding upstream 517500 54171215 ~ 54171423 (+)
G19958 NA non-coding upstream 631003 54056860 ~ 54057920 (+)
G20177 NA non-coding downstream 42193 54733020 ~ 54737869 (+)
G20218 NA non-coding downstream 104669 54795496 ~ 54797145 (+)
G20156 NA other upstream 24397 54663311 ~ 54664526 (+)
G20085 NA other upstream 106524 54573474 ~ 54582399 (+)
G20099 NA other upstream 159719 54527752 ~ 54529204 (+)
AMCG00017357 NA other upstream 236869 54423553 ~ 54452054 (+)
G20013 NA other upstream 296332 54307795 ~ 54392591 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other downstream 117639 54808466 ~ 54809106 (+)
AMCG00017369 ssr4,LOC107671948,LOC107737640,LOC108425558,LOC107560913 other downstream 152113 54842940 ~ 54846281 (+)

Expression


Co-expression Network