G10185



Basic Information


Item Value
gene id G10185
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 200290 ~ 201002 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU12684
taaaataacaccaaattgatcagaaatacaatgtagacattgttaatgttgtaaatgactattgtagctggaaacggctgatttgtaatatCTACActggcgtacagaggcccattatcagcaaccatcagtcctgtgttccaatggcacattgtgtttgctgatccaagtttatcattttaaaaggctaattgatcattagaaaacccttttgcaattatgttagcacagctgacaactgttgtgctgattaaagaagcaataaaactggccttctttagactagttgagtatctggagcatcagcaattgtggtttcgattacaggctcaaaatggccgaaaaacaaagaactttcttctgaaactcatcagtctattcttgttttgagaaatgaaggctattccatgtgagaaattgccaagaaactgaaggtctcgtacaacgctgtgtactactcccttcacagaacagcacaaactggctctaaccagaatagaaagaggagtgggaggccccggtgcacacctgagcaagaggacaaatacattagtgtctagtttgagaaacagacgcctcacaggtcctcaactggaagcttcattaaatagtacttgcaaaacaccagtctcaacgtcaacagtgaagaggcgactacAGGATGCTgaccttctaggcagagttgcaaactaaaagccatatctcagactggc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU12684 True 713 lncRNA 0.41 1 200290 201002

Neighbor


gene id symbol gene type direction distance location
AMCG00016008 NA coding upstream 107440 69832 ~ 92850 (+)
AMCG00016009 zgc:112408,LOC107590289,LOC107666604,LOC107705181,LOC107721840 coding downstream 4888 205890 ~ 221884 (+)
AMCG00016014 NA coding downstream 56225 257227 ~ 269920 (+)
AMCG00016016 LOC106613191 coding downstream 588184 789186 ~ 799369 (+)
AMCG00016017 robo2 coding downstream 754646 955648 ~ 996162 (+)
AMCG00016015 NA coding downstream 808786 1009788 ~ 1035222 (+)
G10218 NA non-coding downstream 24221 225223 ~ 243082 (+)
G10230 NA non-coding downstream 93119 294121 ~ 315956 (+)
G10234 NA non-coding downstream 147520 348522 ~ 348895 (+)
G10263 NA non-coding downstream 996627 1197629 ~ 1197883 (+)
G10342 NA non-coding downstream 2049424 2250426 ~ 2250627 (+)
G10350 NA other downstream 2111596 2312598 ~ 2313159 (+)
G10371 LOC105010782,LOC106603266 other downstream 2284540 2485542 ~ 2487751 (+)
AMCG00016030 NA other downstream 2558345 2759347 ~ 2812231 (+)
G10739 foxo1 other downstream 4226144 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 6440656 6641658 ~ 6661668 (+)

Expression



Co-expression Network