G10218


Basic Information

Item Value
gene id G10218
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 225223 ~ 243082 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12729
tgttttttcccaCAGCACCTTTCCTttaccattttttgttttagttgaaACACATCAGTAACCAGACTGGAATTCCAAAGGTGTTCTGACAGGTTTTAAGCAAGGACACAATGCTCAGGTGGTGGATACTCGCGTTCTTTGGCTCTTTTGTCATCTGTAAAGgagtcaacctcgatcctgtgctatcctacacccagcacatcaccacgctgacacacacctgcagattactcccgagcaacatacgccgaatccgtcccttcctcaccaactactcgactcagttGCTCATCCACTATTATGATAGGAAGGACACTTTTTTGGGTTCCAACGCTTTGATAATGTGATCGgactattactaataatagtaTTAGGCTACCaattaagaattgtttttaaaacaaagtgaaacaTTGCAGCTCTGATGTGATCATCGTTAGCCGGACAAACTAAACATGTTGGTAATTTTGTCAGAGAACCTCCACAcgttgcaaaaacaaacaaacaaaaaaaaacattggaacattacacaacaaaacaaaacattgagtAATTTAAACagtgttcttttaaatattaatttgaacctaaaatgtgtatttcaaatgctacTTTTAAAGTCAGAATTTTAAGAAAACttcaaaacatgcaaaaaaaaatatttccaatgGAGTCATTTGCAcatctttcttttattattttgtgtgtatttgtttataatatttttatttgaatttgtgtatttctatgttgattgaacaataaaactgaattggAAAGTGAATGTGAAGTCTTCCTACTTCTTAACTTTGGAATAGTGACagatcagtgacagaaaatcacaattaaatccg

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU12729 True 854 lncRNA 0.48 3 225223 243082

Neighbor

gene id symbol gene type direction distance location
AMCG00016009 zgc:112408,LOC107590289,LOC107666604,LOC107705181,LOC107721840 coding upstream 3339 205890 ~ 221884 (+)
AMCG00016008 NA coding upstream 132373 69832 ~ 92850 (+)
AMCG00016014 NA coding downstream 14145 257227 ~ 269920 (+)
AMCG00016016 LOC106613191 coding downstream 546104 789186 ~ 799369 (+)
AMCG00016017 robo2 coding downstream 712566 955648 ~ 996162 (+)
AMCG00016015 NA coding downstream 766706 1009788 ~ 1035222 (+)
AMCG00016021 NA coding downstream 1928627 2171709 ~ 2369480 (+)
G10185 NA non-coding upstream 24221 200290 ~ 201002 (+)
G10230 NA non-coding downstream 51039 294121 ~ 315956 (+)
G10234 NA non-coding downstream 105440 348522 ~ 348895 (+)
G10263 NA non-coding downstream 954547 1197629 ~ 1197883 (+)
G10342 NA non-coding downstream 2007344 2250426 ~ 2250627 (+)
G10345 NA non-coding downstream 2014231 2257313 ~ 2257732 (+)
G10350 NA other downstream 2069516 2312598 ~ 2313159 (+)
G10371 LOC105010782,LOC106603266 other downstream 2242460 2485542 ~ 2487751 (+)
AMCG00016030 NA other downstream 2516265 2759347 ~ 2812231 (+)
G10739 foxo1 other downstream 4184064 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 6398576 6641658 ~ 6661668 (+)

Expression


Co-expression Network