Gene
RNA
| Item | Value |
|---|---|
| gene id | G10343 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 2250401 ~ 2250641 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| Retrotransposon-derived protein PEG10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU12872 | True | 241 | lncRNA | 0.34 | 1 | 2250401 | 2250641 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016019 | robo1,LOC106613191 | coding | downstream | 790569 | 1459072 ~ 1459832 (-) |
| AMCG00016020 | robo1 | coding | downstream | 909190 | 1313779 ~ 1341211 (-) |
| AMCG00016018 | NA | coding | downstream | 938316 | 1263535 ~ 1312085 (-) |
| AMCG00016010 | NA | coding | downstream | 2053503 | 187079 ~ 196898 (-) |
| AMCG00016012 | NA | coding | downstream | 2068864 | 159706 ~ 181537 (-) |
| AMCG00016023 | NA | coding | upstream | 212430 | 2463071 ~ 2515080 (-) |
| AMCG00016022 | NA | coding | upstream | 268902 | 2519543 ~ 2527277 (-) |
| AMCG00016026 | NA | coding | upstream | 345373 | 2596014 ~ 2600477 (-) |
| AMCG00016027 | NA | coding | upstream | 356067 | 2606708 ~ 2671709 (-) |
| AMCG00016028 | timm10b | coding | upstream | 464328 | 2714969 ~ 2715852 (-) |
| G10324 | NA | non-coding | downstream | 162851 | 2087271 ~ 2087550 (-) |
| G10321 | NA | non-coding | downstream | 331065 | 1918429 ~ 1919336 (-) |
| G10319 | NA | non-coding | downstream | 342107 | 1907925 ~ 1908294 (-) |
| G10314 | NA | non-coding | downstream | 406241 | 1843928 ~ 1844160 (-) |
| G10307 | NA | non-coding | downstream | 544805 | 1696805 ~ 1705596 (-) |
| G10346 | NA | non-coding | upstream | 6775 | 2257416 ~ 2257715 (-) |
| G10357 | NA | non-coding | upstream | 174380 | 2425021 ~ 2425480 (-) |
| G10415 | NA | non-coding | upstream | 446028 | 2696669 ~ 2702512 (-) |
| G10432 | NA | non-coding | upstream | 485540 | 2736181 ~ 2736474 (-) |
| G10435 | NA | non-coding | upstream | 499017 | 2749658 ~ 2749864 (-) |
| AMCG00016024 | ilk,LOC106581335 | other | upstream | 281976 | 2532617 ~ 2554946 (-) |
| G10420 | LOC101154678 | other | upstream | 459758 | 2710399 ~ 2710685 (-) |
| AMCG00016029 | NA | other | upstream | 533484 | 2784125 ~ 2846357 (-) |
| G10478 | NA | other | upstream | 783781 | 3034422 ~ 3035183 (-) |
| AMCG00016046 | NA | other | upstream | 1278201 | 3528842 ~ 3542536 (-) |
