G10345


Basic Information

Item Value
gene id G10345
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 2257313 ~ 2257732 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12874
CACATGGCAGATATGCACATTAGGAATCGTGTCCTGAAGGAACTGATGTCTGACCCGTAGTGGCAGAGGTGCTTATGGAGAAGATGCTGGTGTTCTcgttgagacacagtaggccgaGGGCGCGGCTTTAAAGACAGCCTCACGGCATCTTGAACAGACCGATGTTGAGGTCCACAACGCTGAAGTGATGCTTGacttaatggagaaataagttaaaatactgCTATTAAAGGTTGTCCAGATTATAGGAATCTGCAGTACATTGTGAAAACAGCTCAAATTACATCTGCAGTagcatatattcttgtattggtagttaatttataatgtacttttggtggagatgtcaaattactcaaatgaatagaataagagtcatgaagtaagaataagtccattgcccttctcttgagatgtatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12874 True 420 lncRNA 0.43 1 2257313 2257732

Neighbor

gene id symbol gene type direction distance location
AMCG00016015 NA coding upstream 1222091 1009788 ~ 1035222 (+)
AMCG00016017 robo2 coding upstream 1261151 955648 ~ 996162 (+)
AMCG00016016 LOC106613191 coding upstream 1457944 789186 ~ 799369 (+)
AMCG00016014 NA coding upstream 1987393 257227 ~ 269920 (+)
AMCG00016009 zgc:112408,LOC107590289,LOC107666604,LOC107705181,LOC107721840 coding upstream 2035429 205890 ~ 221884 (+)
AMCG00016025 NA coding downstream 314837 2572569 ~ 2596847 (+)
AMCG00016034 NA coding downstream 678223 2935955 ~ 2946364 (+)
AMCG00016031 NA coding downstream 740134 2997866 ~ 2998285 (+)
AMCG00016032 NA coding downstream 740951 2998683 ~ 3054898 (+)
AMCG00016033 NA coding downstream 797276 3055008 ~ 3060444 (+)
G10342 NA non-coding upstream 6686 2250426 ~ 2250627 (+)
G10263 NA non-coding upstream 1059430 1197629 ~ 1197883 (+)
G10234 NA non-coding upstream 1908418 348522 ~ 348895 (+)
G10230 NA non-coding upstream 1941357 294121 ~ 315956 (+)
G10218 NA non-coding upstream 2014231 225223 ~ 243082 (+)
G10352 NA non-coding downstream 108899 2366631 ~ 2416786 (+)
G10356 NA non-coding downstream 167353 2425085 ~ 2425481 (+)
G10372 NA non-coding downstream 231029 2488761 ~ 2489684 (+)
G10389 NA non-coding downstream 283992 2541724 ~ 2543612 (+)
G10419 LOC101154678 non-coding downstream 452681 2710413 ~ 2710752 (+)
G10350 NA other downstream 54866 2312598 ~ 2313159 (+)
G10371 LOC105010782,LOC106603266 other downstream 227810 2485542 ~ 2487751 (+)
AMCG00016030 NA other downstream 501615 2759347 ~ 2812231 (+)
G10739 foxo1 other downstream 2169414 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 4383926 6641658 ~ 6661668 (+)

Expression


Co-expression Network