G10431


Basic Information

Item Value
gene id G10431
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 2736172 ~ 2736476 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12965
CACTATGCGCAAAGTTTTTATACAAGGTTTTTTATTCAACTTCAGGAGAGCAGATACCCCTTTTTAGAcatttgagaaaagtataacatacaCAATTATTTCTACGGTCCAGACAAAAAGAAATCAGATGATTGGTTACTTGATCTATATCAACAAATACCTGTTTCTTTATCTTGTAGGCACACACCTCAgttacatatgtaaataaaacaacaatatggcctattttaaaagtaaacagagGTGTATTAAACATGCTCAGTAAAAGGTCATACAGATGTTGATGAAATGGCCTAATATCATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12965 True 305 lncRNA 0.32 1 2736172 2736476

Neighbor

gene id symbol gene type direction distance location
AMCG00016025 NA coding upstream 139325 2572569 ~ 2596847 (+)
AMCG00016021 NA coding upstream 366692 2171709 ~ 2369480 (+)
AMCG00016015 NA coding upstream 1700950 1009788 ~ 1035222 (+)
AMCG00016017 robo2 coding upstream 1740010 955648 ~ 996162 (+)
AMCG00016016 LOC106613191 coding upstream 1936803 789186 ~ 799369 (+)
AMCG00016034 NA coding downstream 199479 2935955 ~ 2946364 (+)
AMCG00016031 NA coding downstream 261390 2997866 ~ 2998285 (+)
AMCG00016032 NA coding downstream 262207 2998683 ~ 3054898 (+)
AMCG00016033 NA coding downstream 318532 3055008 ~ 3060444 (+)
AMCG00016036 NA coding downstream 411312 3147788 ~ 3164940 (+)
G10423 NA non-coding upstream 18989 2716886 ~ 2717183 (+)
G10421 NA non-coding upstream 20095 2714744 ~ 2716077 (+)
G10419 LOC101154678 non-coding upstream 25420 2710413 ~ 2710752 (+)
G10389 NA non-coding upstream 192560 2541724 ~ 2543612 (+)
G10372 NA non-coding upstream 246488 2488761 ~ 2489684 (+)
G10479 NA non-coding downstream 299708 3036184 ~ 3036419 (+)
G10487 NA non-coding downstream 359500 3095976 ~ 3096205 (+)
G10528 NA non-coding downstream 543935 3280411 ~ 3281165 (+)
G10547 NA non-coding downstream 635075 3371551 ~ 3371894 (+)
G10560 NA non-coding downstream 701598 3438074 ~ 3443096 (+)
G10371 LOC105010782,LOC106603266 other upstream 248421 2485542 ~ 2487751 (+)
G10350 NA other upstream 423013 2312598 ~ 2313159 (+)
AMCG00016030 NA other downstream 22871 2759347 ~ 2812231 (+)
G10739 foxo1 other downstream 1690670 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3905182 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3927610 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 4285671 7022147 ~ 7024851 (+)

Expression


Co-expression Network