G10464


Basic Information

Item Value
gene id G10464
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 2873224 ~ 2963628 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13002
tgtgtatgtatatatatatatatcaaatttTAAATCATCACCACAAAAAACCCTTTGTCatcttatatacatatacacagacatatTTACTTAAGCTTTTGTGATCATTTACTcaattttcaaatgtaacatCACATGTTCAGGCTGTTTTGTAACTTTCACGTtacaaatgtcattttcaacAAAATAGTACCTAAATAGAAGTTTACAAAGGAAAAAGCAAGCTAAAAAGCAAAGCCCTTAATCATACCATTTAAACGCCCCTACTACTTTCtaaaaaaatgattgcattttaaacaaattatgtcAAACATCTCATTTATCAAAGTTGCTCTAAATTTGGAGGTTAAATTAGGCAAGGAAAAAAAGTCTGAATATTCCAAATTAAAGCATCTACCCGAGATTATcttatctatataaaaaaacaacatatgacaGGATTTTCAGATACGCTTCTGGGAATTGAATAGTAGTCTTTAACAGTGCCAAAAAAGCAGCAATTGAACACAAGTCTGGTAATCAACTGATTGAGGTATATTACTTCAGTAAAGGCCCAGTACTGTCCTTGTCAATGTTAGTTTCAAACTTCTGGAGCATTATGAAGACAAATAATAGACAATAGGCCATGGgagtaaatatttcaaatgaggAGACAGACCTGGTTTTGGGTGAAATGGAAATCAAAGACCAAAATCTTAACAATGCCCTGAATTAACCGATACCTTTATCTCACAAAGAGGGTGCCATTTTGGCTTCCAATGTATAActaatattatacatacatacacactcatacatatacatatacatatNNatatatatatatatacactcacctaaag
>TU13003
tgtgtatgtatatatatatatatcaaatttTAAATCATCACCACAAAAAACCCTTTGTCatcttatatacatatacacagacatatTTACTTAAGCTTTTGTGATCATTTACTcaattttcaaatgtaacatCACATGTTCAGGCTGTTTTGTAACTTTCACGTtacaaatgtcattttcaacAAAATAGTACCTAAATAGAAGTTTACAAAGGAAAAAGCAAGCTAAAAAGCAAAGCCCTTAATCATACCATTTAAACGCCCCTACTACTTTCtaaaaaaatgattgcattttaaacaaattatgtcAAACATCTCATTTATCAAAGTTGCTCTAAATTTGGAGGTTAAATTAGGCAAGGAAAAAAAGTCTGAATATTCCAAATTAAAGCATCTACCCGAGATTATcttatctatataaaaaaacaacatatgacaGGATTTTCAGATACGCTTCTGGGAATTGAATAGTAGTCTTTAACAGTGCCAAAAAAGCAGCAATTGAACACAAGTCTGGTAATCAACTGATTGAGGTATATTACTTCAGTAAAGGCCCAGTACTGTCCTTGTCAATGTTAGTTTCAAACTTCTGGAGCATTATGAAGACAAATAATAGACAATAGGCCATGGgagtaaatatttcaaatgaggAGACAGACCTGGTTTTGGGTGAAATGGAAATCAAAGACCAAAATCTTAACAATGCCCTGAATTAACCGATACCTTTATCTCACAAAGAGGGTGCCATTTTGGCTTCCAATGTATAActaatattatacatacatacacactcatacatatacatatacatatNNNNatatatacatatacacagtatgatttactgtcacataacaacaataacacaagtaatagtaatcacgcaacacatgcgctgtaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13002 False 842 lncRNA 0.31 2 2918911 2963628
TU13003 True 901 lncRNA 0.45 2 2873224 2963628

Neighbor

gene id symbol gene type direction distance location
AMCG00016028 timm10b coding downstream 157372 2714969 ~ 2715852 (-)
AMCG00016027 NA coding downstream 201515 2606708 ~ 2671709 (-)
AMCG00016026 NA coding downstream 272747 2596014 ~ 2600477 (-)
AMCG00016022 NA coding downstream 345947 2519543 ~ 2527277 (-)
AMCG00016023 NA coding downstream 358144 2463071 ~ 2515080 (-)
AMCG00016041 NA coding upstream 500038 3463666 ~ 3475993 (-)
AMCG00016042 NA coding upstream 534074 3497702 ~ 3502851 (-)
AMCG00016047 NA coding upstream 659290 3622918 ~ 3668558 (-)
AMCG00016045 NA coding upstream 819906 3783534 ~ 3784496 (-)
AMCG00016050 NA coding upstream 859623 3823251 ~ 3835355 (-)
G10440 NA non-coding downstream 105767 2765494 ~ 2767457 (-)
G10435 NA non-coding downstream 123360 2749658 ~ 2749864 (-)
G10432 NA non-coding downstream 136750 2736181 ~ 2736474 (-)
G10415 NA non-coding downstream 170712 2696669 ~ 2702512 (-)
G10357 NA non-coding downstream 447744 2425021 ~ 2425480 (-)
G10474 NA non-coding upstream 14369 2977997 ~ 2978208 (-)
G10483 NA non-coding upstream 76743 3040371 ~ 3047869 (-)
G10486 NA non-coding upstream 121675 3085303 ~ 3085537 (-)
G10529 NA non-coding upstream 316862 3280490 ~ 3281193 (-)
G10548 NA non-coding upstream 407913 3371541 ~ 3371898 (-)
AMCG00016029 NA other downstream 26867 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 162539 2710399 ~ 2710685 (-)
AMCG00016024 ilk,LOC106581335 other downstream 318278 2532617 ~ 2554946 (-)
G10478 NA other upstream 70794 3034422 ~ 3035183 (-)
AMCG00016046 NA other upstream 565214 3528842 ~ 3542536 (-)
AMCG00016049 NA other upstream 922670 3886298 ~ 3920503 (-)
AMCG00016074 NA other upstream 1940228 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 4717283 7680911 ~ 7753437 (-)

Expression


Co-expression Network