G10478



Basic Information


Item Value
gene id G10478
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3034422 ~ 3035183 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU13017
gagaaattgaacaggtgttcctaataatcctttaggtgagtgtatataaaacatacacaaataatcaGTGTTTTAAGAATCGTAAAATACAAAGCTTCTAAATTCTAAAAAGAATAAGAGGCAGTGTATTTATAAGGACATGTTCTAAAAATCCTATTgaagaaaaaagtacaaatttttttaaaaatatatgcacaGCACTTCAGCAGAACTGGCAGTTCTTATCTCATTATAAACATCACATCCTACAGTACATTCTGTAAGTTACCATCTAACACTGAGACTTGTTTAGACTAAAACTTATTATTCACTGGATCTTCATTGTCATAAAcgtatacattaaattatgcaatggctgttttgtttgcctccctttctttttcagatgcCATTCATGCAGCACTCTCAGGACAGCCCCCAACAGTGTATTTACACATAATGTTCACGATGATTGATGTAGACTTTTTCAGAGCCACTGGTGTGACATATCCACTCCTGGTAAGAGAGCTGTTCATGAGAAGAACTCCTGTGCTCCCAGTAATCTGGTATTGTGTTCCCTTGAAAAAGGTGGTGACTGTCACTTTTCCTGGTCtggaatggaaaacaaacagcattagaaacataataatagaaagaaaatgttgtatagcgtgtaaaaaagggatagagacaaaacaaaatacaaagaatatatagaactacaaaaatatgttaagagagggatcaggaaagcaaacagggaaatagaaagaaacatagctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU13017 True 762 TUCP 0.34 1 3034422 3035183

Neighbor


gene id symbol gene type direction distance location
AMCG00016028 timm10b coding downstream 318570 2714969 ~ 2715852 (-)
AMCG00016027 NA coding downstream 362713 2606708 ~ 2671709 (-)
AMCG00016026 NA coding downstream 433945 2596014 ~ 2600477 (-)
AMCG00016022 NA coding downstream 507145 2519543 ~ 2527277 (-)
AMCG00016023 NA coding downstream 519342 2463071 ~ 2515080 (-)
AMCG00016041 NA coding upstream 428483 3463666 ~ 3475993 (-)
AMCG00016042 NA coding upstream 462519 3497702 ~ 3502851 (-)
AMCG00016047 NA coding upstream 587735 3622918 ~ 3668558 (-)
AMCG00016045 NA coding upstream 748351 3783534 ~ 3784496 (-)
AMCG00016050 NA coding upstream 788068 3823251 ~ 3835355 (-)
G10474 NA non-coding downstream 56214 2977997 ~ 2978208 (-)
G10464 NA non-coding downstream 70794 2873224 ~ 2963628 (-)
G10440 NA non-coding downstream 266965 2765494 ~ 2767457 (-)
G10435 NA non-coding downstream 284558 2749658 ~ 2749864 (-)
G10432 NA non-coding downstream 297948 2736181 ~ 2736474 (-)
G10483 NA non-coding upstream 5188 3040371 ~ 3047869 (-)
G10486 NA non-coding upstream 50120 3085303 ~ 3085537 (-)
G10529 NA non-coding upstream 245307 3280490 ~ 3281193 (-)
G10548 NA non-coding upstream 336358 3371541 ~ 3371898 (-)
G10556 NA non-coding upstream 343195 3378378 ~ 3378585 (-)
AMCG00016029 NA other downstream 188065 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 323737 2710399 ~ 2710685 (-)
AMCG00016024 ilk,LOC106581335 other downstream 479476 2532617 ~ 2554946 (-)
AMCG00016046 NA other upstream 493659 3528842 ~ 3542536 (-)
AMCG00016049 NA other upstream 851115 3886298 ~ 3920503 (-)
AMCG00016074 NA other upstream 1868673 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 4645728 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 5084038 8119221 ~ 8124033 (-)

Expression



Co-expression Network