G10487


Basic Information

Item Value
gene id G10487
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3095976 ~ 3096205 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13027
tttgaatAATGTTCAACCAGGCTTAATAGCCCTGCCCGTTCATTAAATGTGTTGCCCTGAATTCAAGGTAACCATTAAGATGCTACTTATTCTTACAATTACTAATCTGTTAAATCtcaatcatttaattttaaacccctCTTAGATGCAATCTTTACACTTTCAAgttagtgtatttttaatgtcactatttggaaagtttaatttgtctttagtgCGCTCACAGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13027 True 230 lncRNA 0.48 1 3095976 3096205

Neighbor

gene id symbol gene type direction distance location
AMCG00016033 NA coding upstream 35532 3055008 ~ 3060444 (+)
AMCG00016032 NA coding upstream 41078 2998683 ~ 3054898 (+)
AMCG00016031 NA coding upstream 97691 2997866 ~ 2998285 (+)
AMCG00016034 NA coding upstream 149612 2935955 ~ 2946364 (+)
AMCG00016025 NA coding upstream 499129 2572569 ~ 2596847 (+)
AMCG00016036 NA coding downstream 51583 3147788 ~ 3164940 (+)
AMCG00016037 NA coding downstream 92494 3188699 ~ 3189951 (+)
AMCG00016035 NA coding downstream 154482 3250687 ~ 3259152 (+)
AMCG00016038 NA coding downstream 244460 3340665 ~ 3364028 (+)
AMCG00016039 NA coding downstream 355210 3451415 ~ 3485934 (+)
G10479 NA non-coding upstream 59557 3036184 ~ 3036419 (+)
G10431 NA non-coding upstream 359500 2736172 ~ 2736476 (+)
G10423 NA non-coding upstream 378793 2716886 ~ 2717183 (+)
G10421 NA non-coding upstream 379899 2714744 ~ 2716077 (+)
G10419 LOC101154678 non-coding upstream 385224 2710413 ~ 2710752 (+)
G10528 NA non-coding downstream 184206 3280411 ~ 3281165 (+)
G10547 NA non-coding downstream 275346 3371551 ~ 3371894 (+)
G10560 NA non-coding downstream 341869 3438074 ~ 3443096 (+)
G10584 NA non-coding downstream 422683 3518888 ~ 3519591 (+)
G10627 NA non-coding downstream 680871 3777076 ~ 3821028 (+)
AMCG00016030 NA other upstream 283745 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 608225 2485542 ~ 2487751 (+)
G10350 NA other upstream 782817 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 1330941 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3545453 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3567881 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 3925942 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 4173650 7269855 ~ 7302042 (+)

Expression


Co-expression Network