G10528


Basic Information

Item Value
gene id G10528
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3280411 ~ 3281165 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13073
ctgagaaattgatacacgcatttgttacaaagctgtggaacgatcttccagcaaATGTAAgcccccctctgtcttagcctttaaatcacgtctgaagactcatctgtttagtctctgtttttctagcccatagtgccgccggtgtgccatggacatgcaattgcacaactgtctttggaaatgtcctgcactgcatgaccagtatctgagcacgactgccctcttgtcttccagcaacagcctcctctgagggtccaacgaggcacctcgtcccccaccatggaagtctgatgaggcacaacccatcccagaagcacctcaccacggagggtcaacAGGGCATCCATACCCAAGGTtttgacgagccatcgcaacccaaagcctgttgatggtccaaaccctccacccccaatggccagcgagaggcctcctccagagggaagagcacagccagcagcaccgataaagaactttctgatctccttgctgctgtaataactatactgcctggaggggaggcaaccattaggcctaggccctaagccgtggacccccagagattcattttctcctacatgccatccataggagttttttgtttttctctcctccgtgcctaaatggtttatttacttaaatgttcactcactttattctagatcatgtaaaatgtttacaggtctatatttgattttattgtatttatgttttttattttgctatatgtttgttgtatgtttaccagtctgtaaagc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase SMG1 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13073 True 755 lncRNA 0.55 1 3280411 3281165

Neighbor

gene id symbol gene type direction distance location
AMCG00016035 NA coding upstream 21259 3250687 ~ 3259152 (+)
AMCG00016037 NA coding upstream 90460 3188699 ~ 3189951 (+)
AMCG00016036 NA coding upstream 115471 3147788 ~ 3164940 (+)
AMCG00016033 NA coding upstream 219967 3055008 ~ 3060444 (+)
AMCG00016032 NA coding upstream 225513 2998683 ~ 3054898 (+)
AMCG00016038 NA coding downstream 59500 3340665 ~ 3364028 (+)
AMCG00016039 NA coding downstream 170250 3451415 ~ 3485934 (+)
AMCG00016040 NA coding downstream 300515 3581680 ~ 3586657 (+)
AMCG00016043 NA coding downstream 325293 3606458 ~ 3615523 (+)
AMCG00016044 rcbtb2,LOC107699818,LOC107593467,LOC107561474 coding downstream 518424 3799589 ~ 3817285 (+)
G10487 NA non-coding upstream 184206 3095976 ~ 3096205 (+)
G10479 NA non-coding upstream 243992 3036184 ~ 3036419 (+)
G10431 NA non-coding upstream 543935 2736172 ~ 2736476 (+)
G10423 NA non-coding upstream 563228 2716886 ~ 2717183 (+)
G10421 NA non-coding upstream 564334 2714744 ~ 2716077 (+)
G10547 NA non-coding downstream 90386 3371551 ~ 3371894 (+)
G10560 NA non-coding downstream 156909 3438074 ~ 3443096 (+)
G10584 NA non-coding downstream 237723 3518888 ~ 3519591 (+)
G10627 NA non-coding downstream 495911 3777076 ~ 3821028 (+)
G10654 NA non-coding downstream 619411 3900576 ~ 3901422 (+)
AMCG00016030 NA other upstream 468180 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 792660 2485542 ~ 2487751 (+)
G10350 NA other upstream 967252 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 1145981 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3360493 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3382921 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 3740982 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 3988690 7269855 ~ 7302042 (+)

Expression


Co-expression Network