G10560


Basic Information

Item Value
gene id G10560
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3438074 ~ 3443096 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13106
TAAAAATAGACCATACTGAAGTCAAGGTAGTAAGAAGGTGtaggataagggcatctgctaagaaataaataataatgtaacatcCCTGATCAGAATCACTGACATTACATTGATTACAGCCTCTCCTGGGAATCCTCTTGTGAAGCTGCAATGGGAGAATGTACTTCTCTCTGGGTCGGTCTGGCAATAACAGCAATAGCACTGCTCAtatctgtttgtttaaatgtcatcTTCTACAGACAAAGAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13106 True 250 lncRNA 0.39 2 3438074 3443096

Neighbor

gene id symbol gene type direction distance location
AMCG00016038 NA coding upstream 74046 3340665 ~ 3364028 (+)
AMCG00016035 NA coding upstream 178922 3250687 ~ 3259152 (+)
AMCG00016037 NA coding upstream 248123 3188699 ~ 3189951 (+)
AMCG00016036 NA coding upstream 273134 3147788 ~ 3164940 (+)
AMCG00016033 NA coding upstream 377630 3055008 ~ 3060444 (+)
AMCG00016039 NA coding downstream 8319 3451415 ~ 3485934 (+)
AMCG00016040 NA coding downstream 138584 3581680 ~ 3586657 (+)
AMCG00016043 NA coding downstream 163362 3606458 ~ 3615523 (+)
AMCG00016044 rcbtb2,LOC107699818,LOC107593467,LOC107561474 coding downstream 356493 3799589 ~ 3817285 (+)
AMCG00016052 NA coding downstream 399531 3842627 ~ 3854910 (+)
G10547 NA non-coding upstream 66180 3371551 ~ 3371894 (+)
G10528 NA non-coding upstream 156909 3280411 ~ 3281165 (+)
G10487 NA non-coding upstream 341869 3095976 ~ 3096205 (+)
G10479 NA non-coding upstream 401655 3036184 ~ 3036419 (+)
G10431 NA non-coding upstream 701598 2736172 ~ 2736476 (+)
G10584 NA non-coding downstream 75792 3518888 ~ 3519591 (+)
G10627 NA non-coding downstream 333980 3777076 ~ 3821028 (+)
G10654 NA non-coding downstream 457480 3900576 ~ 3901422 (+)
G10695 NA non-coding downstream 534463 3977559 ~ 3979097 (+)
G10707 NA non-coding downstream 766285 4209381 ~ 4209645 (+)
AMCG00016030 NA other upstream 625843 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 950323 2485542 ~ 2487751 (+)
G10350 NA other upstream 1124915 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 984050 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3198562 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3220990 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 3579051 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 3826759 7269855 ~ 7302042 (+)

Expression


Co-expression Network