G10596


Basic Information

Item Value
gene id G10596
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3514439 ~ 3522035 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13145
GGACACGTCCCACGCCGCAGCACCTGGACTCCAGTCACTCGGTCAGTGTTAGTGGAGACTGTGCGTGAAGAGGACCGGACAGGCCATTGCGGACAGCAGGGCAGTGAGCTCTCGGGCTGTCCAAACAGAGCCTGAACATCCACCGCAAACTTTCCCTTTCGAAGACGCTGGGTGTTGCTGAGACGGACACTGCTTTTCCTTATTGCTCTCTTCCGGGTGTCGGTGGCATTCCCTGCAGTCCCGGGACACTTTCACAGGCAGACATGAGCGCCGAGGGCATCGAGCTGCAGCCCCTGGCACAGGCCACTCCGCTGCAGGTCAACGTGCGCATCGCCAGCGAGGAGGGCAGCAGGAGAAATGTGTCCCAGACAGTGAATGAATTGGAGGAAGTCACAGAAGGTAGTCTGTTAGTCTCTAATGGGGAGAATCTGAATGAACAGGTGAGTACATTTTCCACTTTACTTTTCAAACTCCACTAGCTTAGTTTTGTAATCTATGATATACAACATTCacctctgtttgtttttgtattatttcataattCATGGTAGGGTAGGAGACTTTGGGAGCATGTCAATTTG
>TU13146
GGACACGTCCCACGCCGCAGCACCTGGACTCCAGTCACTCGGTCAGTGTTAGTGGAGACTGTGCGTGAAGAGGACCGGACAGGCCATTGCGGACAGCAGGGCAGTGAGCTCTCGGGCTGTCCAAACAGAGCCTGAACATCCACCGCAAACTTTCCCTTTCGAAGACGCTGGGTGTTGCTGAGACGGACACTGCTTTTCCTTATTGCTCTCTTCCGGGTGTCGGTGGCATTCCCTGCAGTCCCGGGACACTTTCACAGGCAGACATGAGCGCCGAGGGCATCGAGCTGCAGCCCCTGGCACAGGCCACTCCGCTGCAGGTCAACGTGCGCATCGCCAGCGAGGAGGGCAGCAGGAGAAATGTGTCCCAGACAGTGAATGAATTGGAGGAAGTCACAGAAGGTAGTCTGTTAGTCTCTAATGGGGAGAATCTGAATGAACAGgttgttccaccatttaggggccagggatgagaagaagCGGGCTCttgaggaaggagagtggagaggaggcagagttagtcttctggcaccggaagagcacatgaggactgaggagagggaggctgcccgagcacagctgagggagtcagtgactgccaggagagccgtctcagtggagtgagctgtgtggaagccggattgcagaggatcaaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13145 False 581 lncRNA 0.52 2 3516013 3522035
TU13146 True 656 lncRNA 0.59 3 3514439 3522035

Neighbor

gene id symbol gene type direction distance location
AMCG00016042 NA coding downstream 11588 3497702 ~ 3502851 (-)
AMCG00016041 NA coding downstream 38446 3463666 ~ 3475993 (-)
AMCG00016028 timm10b coding downstream 798587 2714969 ~ 2715852 (-)
AMCG00016027 NA coding downstream 842730 2606708 ~ 2671709 (-)
AMCG00016026 NA coding downstream 913962 2596014 ~ 2600477 (-)
AMCG00016047 NA coding upstream 100883 3622918 ~ 3668558 (-)
AMCG00016045 NA coding upstream 261499 3783534 ~ 3784496 (-)
AMCG00016050 NA coding upstream 301216 3823251 ~ 3835355 (-)
AMCG00016048 NA coding upstream 406699 3928734 ~ 3947435 (-)
AMCG00016053 lhfp,LOC105029023,LOC107670626,LOC107740377,LOC107593461 coding upstream 582696 4104731 ~ 4105731 (-)
G10556 NA non-coding downstream 135854 3378378 ~ 3378585 (-)
G10548 NA non-coding downstream 142541 3371541 ~ 3371898 (-)
G10529 NA non-coding downstream 233246 3280490 ~ 3281193 (-)
G10486 NA non-coding downstream 428902 3085303 ~ 3085537 (-)
G10483 NA non-coding downstream 466570 3040371 ~ 3047869 (-)
G10624 NA non-coding upstream 219558 3741593 ~ 3742262 (-)
G10673 NA non-coding upstream 347689 3869724 ~ 3912272 (-)
G10692 NA non-coding upstream 449851 3971886 ~ 3973511 (-)
G10696 NA non-coding upstream 455524 3977559 ~ 3979117 (-)
G10698 NA non-coding upstream 465618 3987653 ~ 3987955 (-)
G10478 NA other downstream 479256 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 668082 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 803754 2710399 ~ 2710685 (-)
AMCG00016024 ilk,LOC106581335 other downstream 959493 2532617 ~ 2554946 (-)
AMCG00016046 NA other upstream 6807 3528842 ~ 3542536 (-)
AMCG00016049 NA other upstream 364263 3886298 ~ 3920503 (-)
AMCG00016074 NA other upstream 1381821 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 4158876 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 4597186 8119221 ~ 8124033 (-)

Expression


Co-expression Network