G10695


Basic Information

Item Value
gene id G10695
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3977559 ~ 3979097 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13265
caccgatcctccaccaaatttcacagtgggtgcgagacactgtggcttgtaggcatCTCCAGGtttccgtctaaccattagacgaccaggtgttgggaAAAGCTGataattggactcatcagagaagatgaccttactccagtcatctacggtccaatccttatggtcttttgtaaacctcagcctggctcttctttgcttctcatttgcttttttctagctttgcacgacttcagccctgcccctaggagcctgtttcgaaccgCCCTCGCCATGcccttcaccccagctgccgcttgccattctttttgtaggtcacctgatgtcatcctacagttgttgagtgacattcaaatgagTTGGCATTCATCccagtcagtggagagtcgttttcgccctctgccggtctgtagctttgttgtccccaatgtctgctgcttgaccttgttcttatgaaccgccgtctttgacattttaaggatggaagcaacacgacgctcactgtatccctctcccagtaaagccagaactgaacacttcttttcctcactcaaaactttccttttcaactcttttggtgTGGTCAATAgtaattttttgattccaattactttttagGTACtgctagcactgtttttgccatccggCTGGTCGTATttcaagaggatagtgatgaccacagcagtggtttttatacttttcctcgttaaattttggttcaggtgatcacctaatcactgcctcattcagtagaatgaggtgtgcctgtttTGGAATTcagcagacactggaatggaatggctgccagtcatgtagagatgctgatttaagataaatttgcagtggtctcttaattttttccagagctgtatatgtgtgtgtgtgtgtgtatatgtgtgtgtatatacacagatGATCAATACATCTGCTACAGCTGTGTGCCAATTACCATTTGATGGTCAAACATGGAATTTATtcattcctttttattattctaaTCTCTTGTGGAACTGTACATAACAGGaagcaaacaaaaggaaagTAGTATTCTGAAATGTACCAACATTTGAAGTCATTTGTAATTACTGAATAAATCCAGTAATTAGATTTACtcaataaagtacattttagtaatgtaaaactaatttaaCTGGATTTACCTGTAATTACTCTGTAATGTTAGACCATGTATTTGAAAGATGAAAGCTAGTTCAGCAGAAATGCATAATACACTTTTTACCTGGTTCCACCCTGacagttaaaatgtatgtatgttaacATGTAttcttttgtatatatgtaatgttttgtaataaaaaggtaaatacatatttacatatgtcTGTATATTTGGTAACCTTGCTCTGAATTTTAAGGATTTCCACtctattttttgtaatgtaatgtgtttattctttaaaatatgtgtaatttGTGGAGTGCAATGTAGAGTGGTCAGGCTTTTTTTGAATATGAAGGTCTGGGTTAATATTctcataaacattttaaaagtctaaCACTGTACTGTTTTTCTTGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13265 True 1539 lncRNA 0.39 1 3977559 3979097

Neighbor

gene id symbol gene type direction distance location
AMCG00016051 LOC107671632 coding upstream 11373 3949181 ~ 3966186 (+)
AMCG00016054 NA coding upstream 93257 3883360 ~ 3884302 (+)
AMCG00016052 NA coding upstream 122649 3842627 ~ 3854910 (+)
AMCG00016044 rcbtb2,LOC107699818,LOC107593467,LOC107561474 coding upstream 160274 3799589 ~ 3817285 (+)
AMCG00016043 NA coding upstream 362036 3606458 ~ 3615523 (+)
AMCG00016057 cog6,LOC107740391,LOC107561480,LOC107670561 coding downstream 147393 4126490 ~ 4128878 (+)
AMCG00016056 cog6,LOC102796367 coding downstream 181258 4160355 ~ 4188956 (+)
AMCG00016055 cog6 coding downstream 222666 4201763 ~ 4205314 (+)
AMCG00016060 NA coding downstream 490965 4470062 ~ 4477338 (+)
AMCG00016061 NA coding downstream 516721 4495818 ~ 4499954 (+)
G10654 NA non-coding upstream 76137 3900576 ~ 3901422 (+)
G10627 NA non-coding upstream 156531 3777076 ~ 3821028 (+)
G10584 NA non-coding upstream 457968 3518888 ~ 3519591 (+)
G10560 NA non-coding upstream 534463 3438074 ~ 3443096 (+)
G10547 NA non-coding upstream 605665 3371551 ~ 3371894 (+)
G10707 NA non-coding downstream 230284 4209381 ~ 4209645 (+)
G10732 NA non-coding downstream 356944 4336041 ~ 4336304 (+)
G10736 NA non-coding downstream 392390 4371487 ~ 4373721 (+)
G10737 NA non-coding downstream 397210 4376307 ~ 4377663 (+)
G10798 NA non-coding downstream 606137 4585234 ~ 4585486 (+)
AMCG00016030 NA other upstream 1165328 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 1489808 2485542 ~ 2487751 (+)
G10350 NA other upstream 1664400 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 448049 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 2662561 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 2684989 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 3043050 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 3290758 7269855 ~ 7302042 (+)

Expression


Co-expression Network