G10696


Basic Information

Item Value
gene id G10696
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3977559 ~ 3979117 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13266
attctacATTGTATAGTGACAGTCAAGAAAAACAGTACAGTGttagacttttaaaatgtttatgagAATATTAACCCAGACCTTCATATTCAAAAAAAGCCTGACCACTCTACATTGCACTCCACaaattacacatattttaaagaataaacacattacattacaaaaaatagaGTGGAAATCCTTAAAATTCAGAGCAAGGTTACCAAATATACAgacatatgtaaatatgtatttacctttttattacaaaacattacatatatacaaaagaaTACATgttaacatacatacattttaactgtCAGGGTGGAACCAGGTAAAAAGTGTATTATGCATTTCTGCTGAACTAGCTTTCATCTTTCAAATACATGGTCTAACATTACAGAGTAATTACAGGTAAATCCAGttaaattagttttacattactaaaatgtactttattgaGTAAATCTAATTACTGGATTTATTCAGTAATTACAAATGACTTCAAATGTTGGTACATTTCAGAATACTActttccttttgtttgcttCCTGTTATGTACAGTTCCACAAGAGAttagaataataaaaaggaatgaATAAATTCCATGTTTGACCATCAAATGGTAATTGGCACACAGCTGTAGCAGATGTATTGATCatctgtgtatatacacacacatatacacacacacacacacatatacagctctggaaaaaattaagagaccactgcaaatttatcttaaatcagcatctctacatgactggcagccattccattccagtgtctgctgAATTCCAaaacaggcacacctcattctactgaatgaggcagtgattaggtgatcacctgaaccaaaatttaacgaggaaaagtataaaaaccactgctgtggtcatcactatcctcttgaaATACGACCAGccggatggcaaaaacagtgctagcaGTACctaaaaagtaattggaatcaaaaaattacTATTGACCAcaccaaaagagttgaaaaggaaagttttgagtgaggaaaagaagtgttcagttctggctttactgggagagggatacagtgagcgtcgtgttgcttccatccttaaaatgtcaaagacggcggttcataagaacaaggtcaagcagcagacattggggacaacaaagctacagaccggcagagggcgaaaacgactctccactgactggGATGAATGCCAActcatttgaatgtcactcaacaactgtaggatgacatcaggtgacctacaaaaagaatggcaagcggcagctggggtgaagggCATGGCGAGGGcggttcgaaacaggctcctaggggcagggctgaagtcgtgcaaagctagaaaaaagcaaatgagaagcaaagaagagccaggctgaggtttacaaaagaccataaggattggaccgtagatgactggagtaaggtcatcttctctgatgagtccaattatCAGCTTTtcccaacacctggtcgtctaatggttagacggaaaCCTGGAGatgcctacaagccacagtgtctcgcacccactgtgaaatttggtggaggatcggtg

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU13266 True 1559 lncRNA 0.38 1 3977559 3979117

Neighbor

gene id symbol gene type direction distance location
AMCG00016048 NA coding downstream 30124 3928734 ~ 3947435 (-)
AMCG00016050 NA coding downstream 142204 3823251 ~ 3835355 (-)
AMCG00016045 NA coding downstream 193063 3783534 ~ 3784496 (-)
AMCG00016047 NA coding downstream 309001 3622918 ~ 3668558 (-)
AMCG00016042 NA coding downstream 474708 3497702 ~ 3502851 (-)
AMCG00016053 lhfp,LOC105029023,LOC107670626,LOC107740377,LOC107593461 coding upstream 125614 4104731 ~ 4105731 (-)
AMCG00016058 NA coding upstream 397328 4376445 ~ 4378160 (-)
AMCG00016059 foxo1 coding upstream 445871 4424988 ~ 4427749 (-)
AMCG00016063 NA coding upstream 464299 4443416 ~ 4451855 (-)
AMCG00016064 LOC105011210,LOC107718790 coding upstream 497222 4476339 ~ 4490665 (-)
G10692 NA non-coding downstream 4048 3971886 ~ 3973511 (-)
G10673 NA non-coding downstream 65287 3869724 ~ 3912272 (-)
G10624 NA non-coding downstream 235297 3741593 ~ 3742262 (-)
G10592 NA non-coding downstream 430468 3490758 ~ 3547091 (-)
G10596 NA non-coding downstream 455524 3514439 ~ 3522035 (-)
G10698 NA non-coding upstream 8536 3987653 ~ 3987955 (-)
G10715 NA non-coding upstream 187661 4166778 ~ 4170338 (-)
G10735 NA non-coding upstream 375736 4354853 ~ 4355296 (-)
G10740 NA non-coding upstream 392348 4371465 ~ 4373721 (-)
G10805 NA non-coding upstream 607606 4586723 ~ 4587875 (-)
AMCG00016049 NA other downstream 57056 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 435023 3528842 ~ 3542536 (-)
G10478 NA other downstream 942376 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 1131202 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 1266874 2710399 ~ 2710685 (-)
AMCG00016074 NA other upstream 924739 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 3701794 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 4140104 8119221 ~ 8124033 (-)
G11326 NA other upstream 4212429 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 4844428 8823545 ~ 8827760 (-)

Expression


Co-expression Network