G10707


Basic Information

Item Value
gene id G10707
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4209381 ~ 4209645 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13277
cttaaagggagtgctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagcaaaccaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccattgccaagcagcttggtgagaaggtgacaacagttggtgtgattatttgcaaatggaagaaacacaaaataactgtcagtctcccttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13277 True 265 lncRNA 0.35 1 4209381 4209645

Neighbor

gene id symbol gene type direction distance location
AMCG00016055 cog6 coding upstream 4067 4201763 ~ 4205314 (+)
AMCG00016056 cog6,LOC102796367 coding upstream 20425 4160355 ~ 4188956 (+)
AMCG00016057 cog6,LOC107740391,LOC107561480,LOC107670561 coding upstream 80503 4126490 ~ 4128878 (+)
AMCG00016051 LOC107671632 coding upstream 243195 3949181 ~ 3966186 (+)
AMCG00016054 NA coding upstream 325079 3883360 ~ 3884302 (+)
AMCG00016060 NA coding downstream 260417 4470062 ~ 4477338 (+)
AMCG00016061 NA coding downstream 286173 4495818 ~ 4499954 (+)
AMCG00016067 proser1,LOC107556855 coding downstream 322679 4532324 ~ 4553950 (+)
AMCG00016066 stoml3b,stoml3,LOC103043838,LOC107556874,LOC108444492,LOC107720596,LOC103140675 coding downstream 360546 4570191 ~ 4576419 (+)
AMCG00016076 NA coding downstream 838563 5048208 ~ 5108992 (+)
G10695 NA non-coding upstream 230284 3977559 ~ 3979097 (+)
G10654 NA non-coding upstream 307959 3900576 ~ 3901422 (+)
G10627 NA non-coding upstream 388353 3777076 ~ 3821028 (+)
G10584 NA non-coding upstream 689790 3518888 ~ 3519591 (+)
G10560 NA non-coding upstream 766285 3438074 ~ 3443096 (+)
G10732 NA non-coding downstream 126396 4336041 ~ 4336304 (+)
G10736 NA non-coding downstream 161842 4371487 ~ 4373721 (+)
G10737 NA non-coding downstream 166662 4376307 ~ 4377663 (+)
G10798 NA non-coding downstream 375589 4585234 ~ 4585486 (+)
G10794 NA non-coding downstream 376903 4586548 ~ 4587637 (+)
AMCG00016030 NA other upstream 1397150 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 1721630 2485542 ~ 2487751 (+)
G10350 NA other upstream 1896222 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 217501 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 2432013 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 2454441 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 2812502 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 3060210 7269855 ~ 7302042 (+)

Expression


Co-expression Network