G10736


Basic Information

Item Value
gene id G10736
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4371487 ~ 4373721 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13309
TATGGCTTCATTACAGCGACTGCCAAGAGTGTTCTTGTCCATATTCATGTTCATAGTACAACATCATCAGGCACTTGTTCTCTGAGAAGCATGCAAGAAAGCACTAtggttcatgtatttatttactaaattgtttgtgtgtgtgtctgtgtttgtgtgtgtgtgtgtgtgtgtgtattttcagtcAATATAAAGCAGAGGCATTTTCTAATTATGCTTGATGCCAACCAGCCCACTgcaagaaatatttatttatatttaagccAATAATCCCTTAAACAAAGGGCACGCTCCTGCTTTCAAAcatatagattttatttctttatataaaccAACACATtgcagtctgtttttgtttttgattgcaAATCACATAAAATTCATATCAATTACTGTTCATGAGTTCAGAAAtgtaacagatttaaaataataagtaacatgtttttgtttgttttcttttgttttaattccatcAGTGAGGAGCActgattataaaatgttacagaagtgcaaaattcttttttttctgcctttatAAAAATTGGTCCAAATATCTCCTTTCCAGCAAACTGctaaaactttttattttgtttttattttttcattaacacaactttttttttctacattttaaagttttcttaTGAACTTCAACTAAGTACAAGAATAACAGTGTCAGTTTACCAAAAAAGCAGAGCAAATCATTTTGTCTAATAACTAAATATACTTCATATTGTTTTTCTCATATAACTAtctgaaacaaatacatctgtgaCATAAAATATCTCCAACAGCtctataatacaatataacatttttttttccataagtacaaatcacaaaaaactaaaacaaaaataaagtacaagtATGCATAGGTGAGATCATTAGCAAAGCATTTCacaaagcaatttttttttttttttagtttttttgtaattatttcttaaCCGTTTACATAAAGGACCCATAATGTTTATGTTAATGGAGATAATTAAACTGTAACTGATCAGAGTGTGTACAATAATTTACATGTACATAAGACATACAAGCAGAGCTCCATCTAATAATTACAATTCACAGGAATTCGCTGTACACCTCCCCGCATTGTAATATTTGGAAACTTGGATGAATGGAACTTGACCTCCTTTTCAGATTGTTACAGCAAATGGATTTCAAATCCAGTTTTATCAGCTAGCACAGGCACTGGCTCCTTCAGACATTCACCAGCATGTTCGGGTTTTCACTTTACCTGAGCTGCTACTAAGTAATCTGAACTCATTACCTGCTTTAACTGGTTCAATTTCAGTTCCCCCTTGCCTTTCAGTGATTTAAAAAGACCCATAATTGTCCTAGACCCCGGCCTAGTATACCGAACTTAACTTGGGAGTTCCATCAATCGGAGAAACGGAGACAGCACTAATGTAAATGGGCACTGTATCTGTATGAGGCGTGGGGTATccttttttgattgtttccatCGGTGTTTCTGATACCTTTTGACGCAAAGACGATCATAGCTGTGAGAGGTGCTGATAccagaaaaaattaaattaaataaaaacacaaacacatatatacattacaaatcaatatataaGTAACACCTAAATATCTGACATACTTCCTTTTGAGATGTGGTATTGCttgcatataaaacattttacatcagGGTTGGGCTTTGGCTGAGTGTGACTCACAGTCAGATTCCCCTCCTGAAGCAGGGTCCTTTATGATGTTGTTGAGCATTCATTGAGGTGTTTTAGTGGTTGCCTTCCAAAACTTTCCAAAAATGCTGCTTCCTTCTCCTCCAGGAAAGGCACGTGTTTCTTGCCAGCTGTGAAACCCGATTTCTAACATCTGTCCCCTCTCTCAATGGCAGTGTTGAGTATACTCGACTCTAGGGTGCTGACATGAAATGGGAGGAAAGGACTGTGCTCACTATGATCAGGTCTTTACAAAATGGAACAATGATCCAAAGTAAAAATGAGGTATACTTTCCAAAGCCCAAACAACTCATGTTACACCATGCCATTTTAttgctgtttcttttctttttactacAAACTGCAACTTTTCTGAGCAGTTTCTCTGGTCTGCTGCAGTTGGACTGTACAAAAAAAGTCCATGTATTTATCAGATTTTGCTGAGTTGATACGCTCAATCAAGATTACAGAGAAAGGAATGATAAAACAAAAcgattattttttcacaattcaCTAATGGATACATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13309 True 2235 lncRNA 0.34 1 4371487 4373721

Neighbor

gene id symbol gene type direction distance location
AMCG00016055 cog6 coding upstream 166173 4201763 ~ 4205314 (+)
AMCG00016056 cog6,LOC102796367 coding upstream 182531 4160355 ~ 4188956 (+)
AMCG00016057 cog6,LOC107740391,LOC107561480,LOC107670561 coding upstream 242609 4126490 ~ 4128878 (+)
AMCG00016051 LOC107671632 coding upstream 405301 3949181 ~ 3966186 (+)
AMCG00016054 NA coding upstream 487185 3883360 ~ 3884302 (+)
AMCG00016060 NA coding downstream 96341 4470062 ~ 4477338 (+)
AMCG00016061 NA coding downstream 122097 4495818 ~ 4499954 (+)
AMCG00016067 proser1,LOC107556855 coding downstream 158603 4532324 ~ 4553950 (+)
AMCG00016066 stoml3b,stoml3,LOC103043838,LOC107556874,LOC108444492,LOC107720596,LOC103140675 coding downstream 196470 4570191 ~ 4576419 (+)
AMCG00016076 NA coding downstream 674487 5048208 ~ 5108992 (+)
G10732 NA non-coding upstream 35183 4336041 ~ 4336304 (+)
G10707 NA non-coding upstream 161842 4209381 ~ 4209645 (+)
G10695 NA non-coding upstream 392390 3977559 ~ 3979097 (+)
G10654 NA non-coding upstream 470065 3900576 ~ 3901422 (+)
G10627 NA non-coding upstream 550459 3777076 ~ 3821028 (+)
G10737 NA non-coding downstream 2586 4376307 ~ 4377663 (+)
G10798 NA non-coding downstream 211513 4585234 ~ 4585486 (+)
G10794 NA non-coding downstream 212827 4586548 ~ 4587637 (+)
G10853 NA non-coding downstream 534085 4907806 ~ 4912418 (+)
G10939 NA non-coding downstream 1467507 5841228 ~ 5841821 (+)
AMCG00016030 NA other upstream 1559256 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 1883736 2485542 ~ 2487751 (+)
G10350 NA other upstream 2058328 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 53425 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 2267937 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 2290365 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 2648426 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 2896134 7269855 ~ 7302042 (+)

Expression


Co-expression Network