G10739 (foxo1)


Basic Information

Item Value
gene id G10739
gene name foxo1
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4427146 ~ 4428059 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13312
GCCCGCTCTCCTGGGCCGGCTCCGAACTCACCTTCCAGCCGGCGGAGCTGTTGCTGTCGCCCTTGTCCTTGAAGTAGGGGACGCTCTTGACCATCCAGTCGTAGATCTGCGACAAGGTGAGGCGCTTCTCGGGAGAGCTCTCGATGGCTTTGGTGATCAGGTCGGCGTAAGACATATTTCCCCAGGCATTGCGTCGAGAGGAGCTGCTCTTCCGCTGGGCAGCAGCAGCCACCGAGGCGGCCGAGCCGGCCGGGGAGGACAGGGGCGGCACCTGCTGCTGGTGCGGGAGCTGGGGGCTCGGgtgctgatgctgctgctgtgacGGCTGGTGGACACAGGTCTCCCGGCACTGGAAATCATTGCACAGCACAAGCGGCTTCTGGTCGGGGTAGTCTTCACTCTCCTCCAGCAAACTGAGATTGTTAATGAAGTCGACATTGCCGCCGGGCTCCTGCTGCACGGAAGGGGCTGGTGACGAGGTGTTGGAGTTGGCAGGGTTAATAAACTCGGGTCGCGGCAGCGGCCAGGTGCAAGACCGGGGCCGTGAGAGCGGCTCAAAATCCGGGTCGATCTCCACCACTTGTTGCTGCGGAGCTTCAGCCATAATACTAGTACTAGTACTACCCAACTTTCACATAGACCTACGCAAAGGCACAaccagcaggaaaaaaaaaacttcgtCACTTCATAAACTTCTACTTATAAAAGTCACGGAACGGGAGCCAAAGCGGATCATAGAGATGAACAATCGccaggaaatgtgtttttaaggtcTGTTAGCGGCTCCTTTGGGTTTTGTTTACCTTGACAGGTTGTTTcgtctgttttttaaatccaggTTTAAGAAGATCGTATTCGTACCATGTCTGTCACCCCCAGTTGTTGCTTGTTGAGTGTTGATCTGCTAGACTGGC

Function

symbol description
foxo1 Enables several functions, including DNA-binding transcription factor activity; beta-catenin binding activity; and ubiquitin protein ligase binding activity. Involved in several processes, including cellular response to hyperoxia; positive regulation of catabolic process; and regulation of apoptotic process. Located in cytoplasm and nucleus. Implicated in alveolar rhabdomyosarcoma. Biomarker of congestive heart failure; hepatocellular carcinoma; and prostate cancer.

NR:

description
PREDICTED: forkhead box protein O1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13312 True 914 TUCP 0.37 1 4427146 4428059

Neighbor

gene id symbol gene type direction distance location
AMCG00016055 cog6 coding upstream 221832 4201763 ~ 4205314 (+)
AMCG00016056 cog6,LOC102796367 coding upstream 238190 4160355 ~ 4188956 (+)
AMCG00016057 cog6,LOC107740391,LOC107561480,LOC107670561 coding upstream 298268 4126490 ~ 4128878 (+)
AMCG00016051 LOC107671632 coding upstream 460960 3949181 ~ 3966186 (+)
AMCG00016054 NA coding upstream 542844 3883360 ~ 3884302 (+)
AMCG00016060 NA coding downstream 42003 4470062 ~ 4477338 (+)
AMCG00016061 NA coding downstream 67759 4495818 ~ 4499954 (+)
AMCG00016067 proser1,LOC107556855 coding downstream 104265 4532324 ~ 4553950 (+)
AMCG00016066 stoml3b,stoml3,LOC103043838,LOC107556874,LOC108444492,LOC107720596,LOC103140675 coding downstream 142132 4570191 ~ 4576419 (+)
AMCG00016076 NA coding downstream 620149 5048208 ~ 5108992 (+)
G10737 NA non-coding upstream 49483 4376307 ~ 4377663 (+)
G10736 NA non-coding upstream 53425 4371487 ~ 4373721 (+)
G10732 NA non-coding upstream 90842 4336041 ~ 4336304 (+)
G10707 NA non-coding upstream 217501 4209381 ~ 4209645 (+)
G10695 NA non-coding upstream 448049 3977559 ~ 3979097 (+)
G10798 NA non-coding downstream 157175 4585234 ~ 4585486 (+)
G10794 NA non-coding downstream 158489 4586548 ~ 4587637 (+)
G10853 NA non-coding downstream 479747 4907806 ~ 4912418 (+)
G10939 NA non-coding downstream 1413169 5841228 ~ 5841821 (+)
G11021 LOC107718733,LOC107555187 non-coding downstream 2307551 6735610 ~ 6744358 (+)
AMCG00016030 NA other upstream 1614915 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 1939395 2485542 ~ 2487751 (+)
G10350 NA other upstream 2113987 2312598 ~ 2313159 (+)
AMCG00016079 NA other downstream 2213599 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 2236027 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 2594088 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 2841796 7269855 ~ 7302042 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other downstream 3018391 7446450 ~ 7478586 (+)

Expression


Co-expression Network