Gene
RNA
| Item | Value |
|---|---|
| gene id | G10794 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 4586548 ~ 4587637 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019825 | oxygen binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU13379 | True | 1090 | lncRNA | 0.59 | 1 | 4586548 | 4587637 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016066 | stoml3b,stoml3,LOC103043838,LOC107556874,LOC108444492,LOC107720596,LOC103140675 | coding | upstream | 10129 | 4570191 ~ 4576419 (+) |
| AMCG00016067 | proser1,LOC107556855 | coding | upstream | 32598 | 4532324 ~ 4553950 (+) |
| AMCG00016061 | NA | coding | upstream | 86594 | 4495818 ~ 4499954 (+) |
| AMCG00016060 | NA | coding | upstream | 109210 | 4470062 ~ 4477338 (+) |
| AMCG00016055 | cog6 | coding | upstream | 381234 | 4201763 ~ 4205314 (+) |
| AMCG00016076 | NA | coding | downstream | 460571 | 5048208 ~ 5108992 (+) |
| AMCG00016077 | NA | coding | downstream | 1784762 | 6372399 ~ 6487517 (+) |
| AMCG00016080 | NA | coding | downstream | 2082669 | 6670306 ~ 6679037 (+) |
| AMCG00016078 | NA | coding | downstream | 2103116 | 6690753 ~ 6700886 (+) |
| AMCG00016092 | hunk,LOC106595522 | coding | downstream | 2406359 | 6993996 ~ 7008772 (+) |
| G10798 | NA | non-coding | upstream | 1062 | 4585234 ~ 4585486 (+) |
| G10737 | NA | non-coding | upstream | 208885 | 4376307 ~ 4377663 (+) |
| G10736 | NA | non-coding | upstream | 212827 | 4371487 ~ 4373721 (+) |
| G10732 | NA | non-coding | upstream | 250244 | 4336041 ~ 4336304 (+) |
| G10707 | NA | non-coding | upstream | 376903 | 4209381 ~ 4209645 (+) |
| G10853 | NA | non-coding | downstream | 320169 | 4907806 ~ 4912418 (+) |
| G10939 | NA | non-coding | downstream | 1253591 | 5841228 ~ 5841821 (+) |
| G11021 | LOC107718733,LOC107555187 | non-coding | downstream | 2147973 | 6735610 ~ 6744358 (+) |
| G11052 | NA | non-coding | downstream | 2364976 | 6952613 ~ 6956605 (+) |
| G11067 | NA | non-coding | downstream | 2402490 | 6990127 ~ 6990569 (+) |
| G10739 | foxo1 | other | upstream | 158489 | 4427146 ~ 4428059 (+) |
| AMCG00016030 | NA | other | upstream | 1774317 | 2759347 ~ 2812231 (+) |
| G10371 | LOC105010782,LOC106603266 | other | upstream | 2098797 | 2485542 ~ 2487751 (+) |
| G10350 | NA | other | upstream | 2273389 | 2312598 ~ 2313159 (+) |
| AMCG00016079 | NA | other | downstream | 2054021 | 6641658 ~ 6661668 (+) |
| G10981 | cct8,LOC107693911 | other | downstream | 2076449 | 6664086 ~ 6665548 (+) |
| AMCG00016091 | NA | other | downstream | 2434510 | 7022147 ~ 7024851 (+) |
| AMCG00016103 | NA | other | downstream | 2682218 | 7269855 ~ 7302042 (+) |
| AMCG00016101 | trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 | other | downstream | 2858813 | 7446450 ~ 7478586 (+) |
