G11067


Basic Information

Item Value
gene id G11067
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 6990127 ~ 6990569 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13711
CGAGTATCCACAAACTGTTGACAGTAACACCTCAGCCAAACTATTGCTtagaaaaacatcaacaaaagcagacattttaagGTTatgttaaaaaggaaacatttaataaagtttattcTTATTCTGGTGTATTTAACAGTGCgttttaatattgatataacCAATGGGATGCCTGTAAGAAAGTCAATATTTAAGAACATTCtcctgttaaatgtatttatttgtagtgtaatgttgtttgtattgtttaccCCTATGTCCCTTTCCtttgagctattaactatgacttcacatcttgtctgcaattattagctcacaaatctaggatgtaggacttgtattaactgtatatttctcttattcacttatgtaattttgaacttgtaatgtgTACTATGCTTTgttctgtaattctagactgtattgcacttttttttaatgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13711 True 443 lncRNA 0.57 1 6990127 6990569

Neighbor

gene id symbol gene type direction distance location
AMCG00016078 NA coding upstream 289241 6690753 ~ 6700886 (+)
AMCG00016080 NA coding upstream 311090 6670306 ~ 6679037 (+)
AMCG00016077 NA coding upstream 502610 6372399 ~ 6487517 (+)
AMCG00016076 NA coding upstream 1881135 5048208 ~ 5108992 (+)
AMCG00016066 stoml3b,stoml3,LOC103043838,LOC107556874,LOC108444492,LOC107720596,LOC103140675 coding upstream 2413708 4570191 ~ 4576419 (+)
AMCG00016092 hunk,LOC106595522 coding downstream 3427 6993996 ~ 7008772 (+)
AMCG00016104 NA coding downstream 56551 7047120 ~ 7053548 (+)
AMCG00016098 NA coding downstream 111632 7102201 ~ 7110849 (+)
AMCG00016102 dchs1,LOC103363423,LOC105909256 coding downstream 196616 7187185 ~ 7190116 (+)
AMCG00016099 arfip2b,LOC103365243,LOC108276920,LOC107718740,LOC107555180 coding downstream 375727 7366296 ~ 7396259 (+)
G11052 NA non-coding upstream 33522 6952613 ~ 6956605 (+)
G11021 LOC107718733,LOC107555187 non-coding upstream 245769 6735610 ~ 6744358 (+)
G10939 NA non-coding upstream 1148306 5841228 ~ 5841821 (+)
G10853 NA non-coding upstream 2077709 4907806 ~ 4912418 (+)
G10794 NA non-coding upstream 2402490 4586548 ~ 4587637 (+)
G11069 NA non-coding downstream 80 6990649 ~ 6990900 (+)
G11098 cunh21orf59,c10h21orf59,LOC107577665,LOC107691672 non-coding downstream 63391 7053960 ~ 7055721 (+)
G11168 NA non-coding downstream 489037 7479606 ~ 7481030 (+)
G11195 NA non-coding downstream 520266 7510835 ~ 7511206 (+)
G11197 NA non-coding downstream 529629 7520198 ~ 7521580 (+)
G10981 cct8,LOC107693911 other upstream 324579 6664086 ~ 6665548 (+)
AMCG00016079 NA other upstream 328459 6641658 ~ 6661668 (+)
G10739 foxo1 other upstream 2562068 4427146 ~ 4428059 (+)
AMCG00016030 NA other upstream 4177896 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 4502376 2485542 ~ 2487751 (+)
AMCG00016091 NA other downstream 31578 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 279286 7269855 ~ 7302042 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other downstream 455881 7446450 ~ 7478586 (+)
AMCG00016136 NA other downstream 2077712 9068281 ~ 9089033 (+)
G11509 NA other downstream 2108851 9099420 ~ 9100036 (+)

Expression


Co-expression Network