G11195


Basic Information

Item Value
gene id G11195
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 7510835 ~ 7511206 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13858
tcaggaagaatctacaggtgcgtgtcagcgtggtgatgtgctgggtgtaggagagcgcaggatcgagggtgactcctagatttttagcggaagaagaaggagagtatggtggattccaaggggatcgagatggggaggtcagcagaaggtgaggaagagtgggggaaaaagaggagatctgatttggagaggttgagcttgaggtggtgcgagtgcatccaggcggaaatggcagacaagcaggaagagatgcatgaggggatgagagggtaagaagagggaaaagacaggaagatctgggcatcatcagcgtagaagtggtaggagaaaccatgggaagcgatgagggggcccagggagcgagtgtagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13858 True 372 lncRNA 0.53 1 7510835 7511206

Neighbor

gene id symbol gene type direction distance location
AMCG00016100 NA coding upstream 92357 7403724 ~ 7418478 (+)
AMCG00016099 arfip2b,LOC103365243,LOC108276920,LOC107718740,LOC107555180 coding upstream 114576 7366296 ~ 7396259 (+)
AMCG00016102 dchs1,LOC103363423,LOC105909256 coding upstream 320719 7187185 ~ 7190116 (+)
AMCG00016098 NA coding upstream 399986 7102201 ~ 7110849 (+)
AMCG00016104 NA coding upstream 457287 7047120 ~ 7053548 (+)
AMCG00016109 trpc4b,LOC107752869,LOC107704724,LOC107588262,LOC107730855,LOC107683445 coding downstream 285719 7796925 ~ 7812179 (+)
AMCG00016115 NA coding downstream 336155 7847361 ~ 7871509 (+)
AMCG00016116 NA coding downstream 502613 8013819 ~ 8030218 (+)
AMCG00016117 alg5,LOC102793295 coding downstream 523697 8034903 ~ 8044945 (+)
AMCG00016112 NA coding downstream 537586 8048792 ~ 8051720 (+)
G11168 NA non-coding upstream 29805 7479606 ~ 7481030 (+)
G11098 cunh21orf59,c10h21orf59,LOC107577665,LOC107691672 non-coding upstream 455114 7053960 ~ 7055721 (+)
G11069 NA non-coding upstream 519935 6990649 ~ 6990900 (+)
G11067 NA non-coding upstream 520266 6990127 ~ 6990569 (+)
G11052 NA non-coding upstream 554230 6952613 ~ 6956605 (+)
G11197 NA non-coding downstream 8992 7520198 ~ 7521580 (+)
G11202 NA non-coding downstream 15841 7527047 ~ 7597325 (+)
G11210 NA non-coding downstream 109656 7620862 ~ 7621557 (+)
G11226 NA non-coding downstream 247269 7758475 ~ 7758725 (+)
G11246 NA non-coding downstream 455782 7966988 ~ 7967311 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 32249 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 208793 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 485984 7022147 ~ 7024851 (+)
G10981 cct8,LOC107693911 other upstream 845287 6664086 ~ 6665548 (+)
AMCG00016079 NA other upstream 849167 6641658 ~ 6661668 (+)
AMCG00016136 NA other downstream 1557075 9068281 ~ 9089033 (+)
G11509 NA other downstream 1588214 9099420 ~ 9100036 (+)
G11545 NA other downstream 1712206 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 2048258 9559464 ~ 9591649 (+)
G11660 NA other downstream 2087609 9598815 ~ 9599156 (+)

Expression


Co-expression Network