G11246


Basic Information

Item Value
gene id G11246
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 7966988 ~ 7967311 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU13921
gttggatcagaccacacgggccagccttctctccccatgtgcatcaatgagccttggctgcccatgaccctgtcgctggttcaccgcttttccttccttggaccacttttgataggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagttgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttacgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13921 True 324 lncRNA 0.59 1 7966988 7967311

Neighbor

gene id symbol gene type direction distance location
AMCG00016115 NA coding upstream 95479 7847361 ~ 7871509 (+)
AMCG00016109 trpc4b,LOC107752869,LOC107704724,LOC107588262,LOC107730855,LOC107683445 coding upstream 154809 7796925 ~ 7812179 (+)
AMCG00016100 NA coding upstream 548510 7403724 ~ 7418478 (+)
AMCG00016099 arfip2b,LOC103365243,LOC108276920,LOC107718740,LOC107555180 coding upstream 570729 7366296 ~ 7396259 (+)
AMCG00016102 dchs1,LOC103363423,LOC105909256 coding upstream 776872 7187185 ~ 7190116 (+)
AMCG00016116 NA coding downstream 46508 8013819 ~ 8030218 (+)
AMCG00016117 alg5,LOC102793295 coding downstream 67592 8034903 ~ 8044945 (+)
AMCG00016112 NA coding downstream 81481 8048792 ~ 8051720 (+)
AMCG00016113 smad9,LOC107728873 coding downstream 114834 8082145 ~ 8092799 (+)
AMCG00016114 NA coding downstream 145710 8113021 ~ 8117376 (+)
G11226 NA non-coding upstream 208263 7758475 ~ 7758725 (+)
G11210 NA non-coding upstream 345431 7620862 ~ 7621557 (+)
G11202 NA non-coding upstream 369663 7527047 ~ 7597325 (+)
G11197 NA non-coding upstream 445408 7520198 ~ 7521580 (+)
G11195 NA non-coding upstream 455782 7510835 ~ 7511206 (+)
G11248 NA non-coding downstream 283 7967594 ~ 7967898 (+)
G11287 NA non-coding downstream 126489 8093800 ~ 8095204 (+)
G11308 NA non-coding downstream 171404 8138715 ~ 8139223 (+)
G11363 NA non-coding downstream 466277 8433588 ~ 8475800 (+)
G11506 NA non-coding downstream 1128482 9095793 ~ 9096050 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 488402 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 664946 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 942137 7022147 ~ 7024851 (+)
G10981 cct8,LOC107693911 other upstream 1301440 6664086 ~ 6665548 (+)
AMCG00016079 NA other upstream 1305320 6641658 ~ 6661668 (+)
AMCG00016136 NA other downstream 1100970 9068281 ~ 9089033 (+)
G11509 NA other downstream 1132109 9099420 ~ 9100036 (+)
G11545 NA other downstream 1256101 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 1592153 9559464 ~ 9591649 (+)
G11660 NA other downstream 1631504 9598815 ~ 9599156 (+)

Expression


Co-expression Network