G11363


Basic Information

Item Value
gene id G11363
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 8433588 ~ 8475800 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14063
agtCTATGTCTGAGATGAAAGCTCCCACCCCTCCCTATTGAAGAACTGTGCTGGAAATCAGACCGACTGAATCAATATCCAGATTTGTGAATTCACATGATACCAGtCTGTATCTGCGATGAACGCTTCCACCCCTCCCTATTGAAGAACTGAGTTGGAAATCAGACTGACAGAAACGATCTCCAGATTGGTGAACTCACATGATACAAGACAGAGCATATTCCTGGGCCAGAAACAGGGTGAGCCAGCCATCGTATCTGTACGCCCCTGTGGGTGAGTTACAGCATGAGAGATGATGGGCGCCCCACTAAGAAAGCTCCTCTGGAAGCGCTTGCTGAGCTCACCTTGACGTCGGAGGTGTCCCGCTGGCAGTTCCGCCACGACCGGGCGATGGAGGAGAACGTGCGGTCAGGGAAACATCTTATAGCCCATCCTATGGTCTGTCTCTTCACCATGGCAAACATCTTCCTAGCCTTGAAGCCTTCAATGAAATGAGGTTTGTCAGTATTGAAGGCCCCATTGTGGGAACAGTGCACTTAGGGGATTCAGTCACAGCTCCCCATACAGCACGGGATACAGGCTGGAGTCTTATCACTGTTGTAGTTCTGCAAGGCATATCTTATTAAAAGGCCAAAGGCCACACTGTGCATGTTAGAATTACAAGTGACGCCTGTTCTGCGAGCAGGGATCATACACAACACTGGAATGTGCCTCTgtacaagattaaaaaaaataaaggaaaggaaacaaggtgaaaaaaaaatctatgacaaaataaaaaggatggCGGCATCTTGCTTGATTTAAACAGGGTTTTCAATAATTCACGTGTGCAAAATTATACCATTAGGGCCTAAGAAAACACTGCGACTGAGCCAGAGATGGAAAATGATGGCAAACTGGGACGGGTTTCAAATTCAGCGTGTTCAACACATCCATTTTTATCAGGGAATGTTATTATAGTCAATGGAGTTTCTATGGAAATATGCCCCATTTACTGTAGCACAGCCTCGGGGTGAATTAATTATCTAGCTTCCTGGCTGTGGCGTACATATTGGCTATTTTAATTGGGCGACgttatattttattgcttcttCGAAGGCTTCCGAGCCGAAGCCAATGGAGATATCAGCTTTGAAAGATGAACACCACCGAACAGTTGGAAtctcaaagtgttttttgtttagcaGATGTTGTAGTCTGTAACATATCGCTTTTACCCGGAAGAAGTAAACAActgcaaaactaaaaactaatttgaaacattttcacactgtGTAGTAAACAATGGGATGTATCTGggacatttaaatgcaattatgtagaatatatttgtGCACATTCTTAAGACATTGCTTTTACAAAACTGCTCTAGGCATATTCCAGTCTATCCTTATGAGATGTCTTGCctgctttctgcattttttcGAATCAGCCAACAGTTCCAATGCACCCCGTCTGAAAGCTTCATGTgctgttaaatgtattgcatattTAGTAGCTATGATGATCAACTGTCTTGTGTGCCTGTACTTGATGGCTGTAACACTGAACACATATAAACCTGTCACGAAGGCGTCtgtaaaatgttattctgtggGCTTTATTTAGTTAGCATATGCCAGTTTACTGGCCTGTGAAATTCTCTCTGAAACCTCTGGGGTGGAACTTTAGCCCAATGAAATTGAGATGTTTAATTTTTCACCCCCCCTTAAagaattgcattgatttcaatttcaatgtcAATGCACCAACGTAAGAATCCATGAAAGCAGATCTCAGTCAGAACTTCTCACACAgggatttaattttgtttgcacATCTGTCCTTAATGTCCTTCACTGGAATCCAATTGTCTTTTAAATTGGGGCtcaaacatttctgtattttgggGGGGATTCTTTCACTATAAGTTTGAGaccaaataagaaataataaaaaaagacaggaaaatggTGTGCCATAAAAATATACCATTGATTTTTTAatcttgttatatatttattttattgaaaacagcAGACGTTGTTATACATATGCAGGGAATGCGTAACCACAGGCCCACATCCACCTCCATCCAACATttctgagtgtctgtctgttcaTTACGATCACTACAAAAAACTGGGTGAGGGGACAGTAACTGGTCCTTTTGACATTGACCTCTCgtagatgtttatttatttaatagtttatAATCGTCCCCTGTTTTCACTGATGTTTTTTGGCATCATAGTTCTGAAGGTATGGGTTAGTACAACTTGACATTTTCCTTCAGAAAACCAGCAATATTATTGGCCAACTCAGCACCAAGCCCCACCTCCAATGCGCACACTTACTATTCTCACGAGCCACTGCAGGGTGCACACGGAGGTGGAGTAGTGGGAGTTGTAGTGATAAGGGGGCGTCTGGTCGTCTTCCCATGTCTCGTAGCGCTCGGCGTAGAAGACCGCACGCTTGGGGTTCAGTGCTCCAATAGGCTGAAAGACACAGAGAAACCAACAGCCACAGATTATACAGTGAAACTACATAGAAAAACACCCCACACCTCCCTCACCATCcacattaattcatattgttATAGACAACCAAAACATGCCCTCATGTGTCCTATTGAATGGTCAGAACACAGCGTGAAATGTAAccaaagattttttttactaAGCTTTTGTTCTTCATTGTAATCCATAACATTAACTCCAGTTAATTACGCCAGTTaattatgttgtgtttatttactggTACACTGTGTACGCTTATGTATATTGATCCTTCACATGAGAAGGGAGAGTGTTCTTTTTAACCATGGGTTGGTACTCTGGCCTTTTTCTCTGGTAAATAATATAACTGTCAAACACTATCAAGCCATTTTTAATGAGCCTTtcgaaaaataaatgcatatatttaaaagaacatcACCACATATCAGACTTTcctcaattaaaaaagaaaatgacagaataattaggttcaattcagttcatttaaattaattctgatgcaacaacaaaaaaaaacacatcagtgcagattctttaaacaaatgtcTGAGCTAAACAATCACTCCAATCTCCTTTAAAACCAATTTGTGGGATTTCCCTGGATTGTATAGGCCTCTGCTTTGAGGAGGAATGTGCTCAATGGATTTTCTGATGGGTTCACTTCCAGTTCATGATTCCTCACTTTGATTGAATGCAACCATACCTTTATTGAAAGCTTTGCTATGGAGACCCAATACCTTTATTcagtaatgataaaaaaattaagatgaGATCAGTGTGGCATTTTTCCCCATTCCCTTAATTTCATTGGAATAAAGAAACAGAGGATAACACTATTGGCTTGCATACTgcacattgttttttctgtggCTCCTGATGAAGTGGCTTGGAAACAGAAATGAGGTTCatgtaaattgcatttaatgtaatctTTATTAATGTTTCATGCAGAGCCTTTACAGACCTCCATTAGATGTGGTGCAGAGAGGCCGAAGGAAAAGGTTGACTTTGGGATTTGTCTGTCAGACCCCATTATTTTCAAGGTGGCCTAAAAAGTTTTAGTGCTGGATTGGAGTCGGGGGAAACTTGATGAATATCTAAATCTTCTGTGGCGCGAGCATGCGAAGCAGTGAGCAGTGAAAAGTTTGGGGTAATCCACAGGGCTTAACCTTGCCTGACATGACTTAGACTTGTGGAACCAAACAGCATGCAGTTCAGCCATGTCTCCATCCTCTCTAAGCCCTCCTGAActactgtaaaatgttaaagtaaACATTGGCATTTTTGGAATTCATTCCGCATGCTGTGAGGCTGCACAGAATCAGTTTGAAACTTTTAACGTACAATATACAGCCCTTTACAAAACCTTCTCTATAATACAAACATTGTTACTTGATCTATATGAGATTACAAGGATATGCAACACGTTCTAACTACACCTTTAAAGTCTCTTTTTTAGCAGCAGTTTGAGGTAATAATTGAGCGGACAGAACAAATGAAGAAGCAGCCTGTTGCGGATGGCACTGTTACATGACCTGCGAGGAACTGACCTTCAGACTGTGAGATTTGTTTCAAATGCCAAAGGGACAGCCGAGTCCACAGCACTGAAATGTCAGAGGTGCAATGTCCGAGCGGTTTGGGACCATAGAGCTGAGGAGCTTGGATCTCCTCAACAATGGATTTGCCACTGCCACTGGAACTGTAAGGAGGGGATAACCAGTGGAAGACTTTGCTTAGAAGACATGTTCTATCCTATACTCCTCTCCCGAACCCTTTCCTTACTGGTCAAGGCCACAAGAGAAGGTTGCAGGAAATcccagaggaaaaaaataggATCTCTGATGGAAGGGCTCAGCACTCTGGGAGTCGAGGGGAAGTACATCATGTACTGAGAGGGGTTGACTTACTTGTGGCGGACCAGAAGTAAAGGGGTACTTCTTAAATGTGTGACTATGCCCTTCTGTTGGGACACTTTATATGATTTCCCCTTTGAGCATCCAATTAAAATTGTAGTATTGTGTACCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14063 True 4527 lncRNA 0.47 5 8433588 8475800

Neighbor

gene id symbol gene type direction distance location
AMCG00016124 LOC108433804,LOC107683036,LOC107752421 coding upstream 107049 8314143 ~ 8326539 (+)
AMCG00016126 dclk1,LOC105909296 coding upstream 199556 8227131 ~ 8234032 (+)
AMCG00016122 NA coding upstream 208454 8206839 ~ 8225134 (+)
AMCG00016123 NA coding upstream 231049 8198874 ~ 8202539 (+)
AMCG00016120 NA coding upstream 238916 8178707 ~ 8194672 (+)
AMCG00016128 mab21l1,LOC107730834 coding downstream 47661 8523461 ~ 8524540 (+)
AMCG00016132 LOC102798547 coding downstream 313169 8788969 ~ 8809035 (+)
AMCG00016135 LOC104923292 coding downstream 488406 8964206 ~ 8978905 (+)
AMCG00016140 NA coding downstream 642102 9117902 ~ 9119438 (+)
AMCG00016143 NA coding downstream 761900 9237700 ~ 9286875 (+)
G11308 NA non-coding upstream 294365 8138715 ~ 8139223 (+)
G11287 NA non-coding upstream 338384 8093800 ~ 8095204 (+)
G11248 NA non-coding upstream 465690 7967594 ~ 7967898 (+)
G11246 NA non-coding upstream 466277 7966988 ~ 7967311 (+)
G11226 NA non-coding upstream 674863 7758475 ~ 7758725 (+)
G11506 NA non-coding downstream 619993 9095793 ~ 9096050 (+)
G11507 NA non-coding downstream 620789 9096589 ~ 9096811 (+)
G11508 NA non-coding downstream 621469 9097269 ~ 9097927 (+)
G11510 NA non-coding downstream 625111 9100911 ~ 9101316 (+)
G11511 NA non-coding downstream 627825 9103625 ~ 9104182 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 955002 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 1131546 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 1408737 7022147 ~ 7024851 (+)
G10981 cct8,LOC107693911 other upstream 1768040 6664086 ~ 6665548 (+)
AMCG00016079 NA other upstream 1771920 6641658 ~ 6661668 (+)
AMCG00016136 NA other downstream 592481 9068281 ~ 9089033 (+)
G11509 NA other downstream 623620 9099420 ~ 9100036 (+)
G11545 NA other downstream 747612 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 1083664 9559464 ~ 9591649 (+)
G11660 NA other downstream 1123015 9598815 ~ 9599156 (+)

Expression


Co-expression Network