Gene
RNA
| Item | Value |
|---|---|
| gene id | G11482 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 9055904 ~ 9059100 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: vacuole membrane protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14210 | True | 513 | lncRNA | 0.53 | 3 | 9055904 | 9059100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016139 | NA | coding | downstream | 325 | 9051060 ~ 9055579 (-) |
| AMCG00016138 | pds5b,LOC107683122,LOC107730842,LOC107587120 | coding | downstream | 28063 | 9002102 ~ 9027841 (-) |
| AMCG00016137 | NA | coding | downstream | 65484 | 8981080 ~ 8990420 (-) |
| AMCG00016133 | rfc3,LOC107589808,LOC107728889,LOC107577751 | coding | downstream | 235196 | 8810847 ~ 8820708 (-) |
| AMCG00016131 | nbeaa | coding | downstream | 384726 | 8657202 ~ 8671178 (-) |
| AMCG00016141 | NA | coding | upstream | 30069 | 9089169 ~ 9110807 (-) |
| AMCG00016142 | NA | coding | upstream | 52177 | 9111277 ~ 9116154 (-) |
| AMCG00016144 | NA | coding | upstream | 60468 | 9119568 ~ 9183910 (-) |
| AMCG00016148 | rxfp2,LOC106591039 | coding | upstream | 208101 | 9267201 ~ 9289324 (-) |
| AMCG00016151 | NA | coding | upstream | 274593 | 9333693 ~ 9358730 (-) |
| G11346 | NA | non-coding | downstream | 724101 | 8326182 ~ 8331803 (-) |
| G11345 | NA | non-coding | downstream | 734862 | 8320697 ~ 8321042 (-) |
| G11314 | NA | non-coding | downstream | 881930 | 8173689 ~ 8173974 (-) |
| G11309 | NA | non-coding | downstream | 917234 | 8136414 ~ 8138670 (-) |
| G11300 | NA | non-coding | downstream | 930521 | 8124990 ~ 8125383 (-) |
| G11571 | NA | non-coding | upstream | 254900 | 9314000 ~ 9314447 (-) |
| G11633 | hmgb1,LOC105901051,LOC103353583 | non-coding | upstream | 376702 | 9435802 ~ 9498753 (-) |
| G11650 | NA | non-coding | upstream | 484408 | 9543508 ~ 9543743 (-) |
| G11658 | NA | non-coding | upstream | 530635 | 9589735 ~ 9594953 (-) |
| G11662 | NA | non-coding | upstream | 636673 | 9695773 ~ 9696054 (-) |
| AMCG00016134 | NA | other | downstream | 228144 | 8823545 ~ 8827760 (-) |
| G11326 | NA | other | downstream | 861472 | 8191546 ~ 8194432 (-) |
| AMCG00016119 | NA | other | downstream | 931871 | 8119221 ~ 8124033 (-) |
| AMCG00016110 | ufm1,LOC107701138 | other | downstream | 1302467 | 7680911 ~ 7753437 (-) |
| AMCG00016074 | NA | other | downstream | 4126004 | 4903856 ~ 4929900 (-) |
| AMCG00016176 | NA | other | upstream | 1775312 | 10834412 ~ 10847811 (-) |
| AMCG00016194 | NA | other | upstream | 2707052 | 11766152 ~ 11781547 (-) |
| AMCG00016203 | zdhhc20,LOC108438268,LOC106578454,LOC108256609 | other | upstream | 2773328 | 11832428 ~ 11947322 (-) |
| AMCG00016211 | NA | other | upstream | 3264061 | 12323161 ~ 12329033 (-) |
| AMCG00016226 | NA | other | upstream | 3790778 | 12849878 ~ 12870560 (-) |
