G11506


Basic Information

Item Value
gene id G11506
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9095793 ~ 9096050 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14239
CCTTGACTGTGTTCTTCAGTAACTTGAAAGCCTCTTGCAGATGTAGTTCTTTAGGGTTCGCAGAGAAGACGGCCAGCTCCCCAGCATGCACTGTGGGGATGGCTGCCGGTGGGCTGGGTCTCAGCTGCAGGTTGCTCACTGCCAGGAGGGAGAATGGCTTCACAATGTCCTCCACTGCCATCTGGCTCAGACCAGTCCAGCTCTTCACAGCTACGAAGTCCTGGCTGCCATTAACGAGATATACCACGGGGGCAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14239 True 258 lncRNA 0.56 1 9095793 9096050

Neighbor

gene id symbol gene type direction distance location
AMCG00016135 LOC104923292 coding upstream 116888 8964206 ~ 8978905 (+)
AMCG00016132 LOC102798547 coding upstream 286758 8788969 ~ 8809035 (+)
AMCG00016128 mab21l1,LOC107730834 coding upstream 571253 8523461 ~ 8524540 (+)
AMCG00016124 LOC108433804,LOC107683036,LOC107752421 coding upstream 769254 8314143 ~ 8326539 (+)
AMCG00016126 dclk1,LOC105909296 coding upstream 861761 8227131 ~ 8234032 (+)
AMCG00016140 NA coding downstream 21852 9117902 ~ 9119438 (+)
AMCG00016143 NA coding downstream 141650 9237700 ~ 9286875 (+)
AMCG00016145 NA coding downstream 300552 9396602 ~ 9406042 (+)
AMCG00016156 hmgb1,LOC105901051,LOC103353583 coding downstream 398412 9494462 ~ 9498792 (+)
AMCG00016157 katnal1,LOC107578067,LOC107697436,LOC107741157 coding downstream 413974 9510024 ~ 9521955 (+)
G11363 NA non-coding upstream 619993 8433588 ~ 8475800 (+)
G11308 NA non-coding upstream 956570 8138715 ~ 8139223 (+)
G11287 NA non-coding upstream 1000589 8093800 ~ 8095204 (+)
G11248 NA non-coding upstream 1127895 7967594 ~ 7967898 (+)
G11246 NA non-coding upstream 1128482 7966988 ~ 7967311 (+)
G11507 NA non-coding downstream 539 9096589 ~ 9096811 (+)
G11508 NA non-coding downstream 1219 9097269 ~ 9097927 (+)
G11510 NA non-coding downstream 4861 9100911 ~ 9101316 (+)
G11511 NA non-coding downstream 7575 9103625 ~ 9104182 (+)
G11570 NA non-coding downstream 217948 9313998 ~ 9314434 (+)
AMCG00016136 NA other upstream 6760 9068281 ~ 9089033 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 1617207 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 1793751 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 2070942 7022147 ~ 7024851 (+)
G10981 cct8,LOC107693911 other upstream 2430245 6664086 ~ 6665548 (+)
G11509 NA other downstream 3370 9099420 ~ 9100036 (+)
G11545 NA other downstream 127362 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 463414 9559464 ~ 9591649 (+)
G11660 NA other downstream 502765 9598815 ~ 9599156 (+)
AMCG00016174 NA other downstream 1748077 10844127 ~ 10958032 (+)

Expression


Co-expression Network