Gene
RNA
| Item | Value |
|---|---|
| gene id | G11508 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 9097269 ~ 9097927 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14241 | True | 659 | lncRNA | 0.39 | 1 | 9097269 | 9097927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016135 | LOC104923292 | coding | upstream | 118364 | 8964206 ~ 8978905 (+) |
| AMCG00016132 | LOC102798547 | coding | upstream | 288234 | 8788969 ~ 8809035 (+) |
| AMCG00016128 | mab21l1,LOC107730834 | coding | upstream | 572729 | 8523461 ~ 8524540 (+) |
| AMCG00016124 | LOC108433804,LOC107683036,LOC107752421 | coding | upstream | 770730 | 8314143 ~ 8326539 (+) |
| AMCG00016126 | dclk1,LOC105909296 | coding | upstream | 863237 | 8227131 ~ 8234032 (+) |
| AMCG00016140 | NA | coding | downstream | 19975 | 9117902 ~ 9119438 (+) |
| AMCG00016143 | NA | coding | downstream | 139773 | 9237700 ~ 9286875 (+) |
| AMCG00016145 | NA | coding | downstream | 298675 | 9396602 ~ 9406042 (+) |
| AMCG00016156 | hmgb1,LOC105901051,LOC103353583 | coding | downstream | 396535 | 9494462 ~ 9498792 (+) |
| AMCG00016157 | katnal1,LOC107578067,LOC107697436,LOC107741157 | coding | downstream | 412097 | 9510024 ~ 9521955 (+) |
| G11507 | NA | non-coding | upstream | 458 | 9096589 ~ 9096811 (+) |
| G11506 | NA | non-coding | upstream | 1219 | 9095793 ~ 9096050 (+) |
| G11363 | NA | non-coding | upstream | 621469 | 8433588 ~ 8475800 (+) |
| G11308 | NA | non-coding | upstream | 958046 | 8138715 ~ 8139223 (+) |
| G11287 | NA | non-coding | upstream | 1002065 | 8093800 ~ 8095204 (+) |
| G11510 | NA | non-coding | downstream | 2984 | 9100911 ~ 9101316 (+) |
| G11511 | NA | non-coding | downstream | 5698 | 9103625 ~ 9104182 (+) |
| G11570 | NA | non-coding | downstream | 216071 | 9313998 ~ 9314434 (+) |
| G11572 | NA | non-coding | downstream | 232964 | 9330891 ~ 9333859 (+) |
| G11672 | NA | non-coding | downstream | 866037 | 9963964 ~ 9964237 (+) |
| AMCG00016136 | NA | other | upstream | 8236 | 9068281 ~ 9089033 (+) |
| AMCG00016101 | trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 | other | upstream | 1618683 | 7446450 ~ 7478586 (+) |
| AMCG00016103 | NA | other | upstream | 1795227 | 7269855 ~ 7302042 (+) |
| AMCG00016091 | NA | other | upstream | 2072418 | 7022147 ~ 7024851 (+) |
| G10981 | cct8,LOC107693911 | other | upstream | 2431721 | 6664086 ~ 6665548 (+) |
| G11509 | NA | other | downstream | 1493 | 9099420 ~ 9100036 (+) |
| G11545 | NA | other | downstream | 125485 | 9223412 ~ 9226245 (+) |
| AMCG00016159 | ubl3,LOC107578048,LOC106604009 | other | downstream | 461537 | 9559464 ~ 9591649 (+) |
| G11660 | NA | other | downstream | 500888 | 9598815 ~ 9599156 (+) |
| AMCG00016174 | NA | other | downstream | 1746200 | 10844127 ~ 10958032 (+) |
