G11510


Basic Information

Item Value
gene id G11510
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9100911 ~ 9101316 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14243
tgtacctacctacctacctacggTTTTAACAGATCCAATGCACAATTTCCTTGATGGACAACTTTTTGGATGACGGACTACAAAATTACGTATCGGTATCAATGTACAAAAAGGAATGGTGTCATAACGGAGAACAGAAATTCTAAAAACACGCCAAGTCTGTGAAATCCCATCATCCCAAAATCAATGTTTCTAATATGTGcccctttaataaaataaatatgaatatgtcaAGACCTGTACTTTAGCTGGAGCAGAACCTGTTCAGGAGTCAGACACAGACGGCCCATCTCCTGAGGAAAGGCCCTCTCCATGGCAGCCCTCTTCCACACGATCCACCGGTAGTGATTGTGAACCCAGCTCTCACTGATGAGCTTCGGGTCCACGGCGGGAGTGTCGCACAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14243 True 406 lncRNA 0.45 1 9100911 9101316

Neighbor

gene id symbol gene type direction distance location
AMCG00016135 LOC104923292 coding upstream 122006 8964206 ~ 8978905 (+)
AMCG00016132 LOC102798547 coding upstream 291876 8788969 ~ 8809035 (+)
AMCG00016128 mab21l1,LOC107730834 coding upstream 576371 8523461 ~ 8524540 (+)
AMCG00016124 LOC108433804,LOC107683036,LOC107752421 coding upstream 774372 8314143 ~ 8326539 (+)
AMCG00016126 dclk1,LOC105909296 coding upstream 866879 8227131 ~ 8234032 (+)
AMCG00016140 NA coding downstream 16586 9117902 ~ 9119438 (+)
AMCG00016143 NA coding downstream 136384 9237700 ~ 9286875 (+)
AMCG00016145 NA coding downstream 295286 9396602 ~ 9406042 (+)
AMCG00016156 hmgb1,LOC105901051,LOC103353583 coding downstream 393146 9494462 ~ 9498792 (+)
AMCG00016157 katnal1,LOC107578067,LOC107697436,LOC107741157 coding downstream 408708 9510024 ~ 9521955 (+)
G11508 NA non-coding upstream 2984 9097269 ~ 9097927 (+)
G11507 NA non-coding upstream 4100 9096589 ~ 9096811 (+)
G11506 NA non-coding upstream 4861 9095793 ~ 9096050 (+)
G11363 NA non-coding upstream 625111 8433588 ~ 8475800 (+)
G11308 NA non-coding upstream 961688 8138715 ~ 8139223 (+)
G11511 NA non-coding downstream 2309 9103625 ~ 9104182 (+)
G11570 NA non-coding downstream 212682 9313998 ~ 9314434 (+)
G11572 NA non-coding downstream 229575 9330891 ~ 9333859 (+)
G11672 NA non-coding downstream 862648 9963964 ~ 9964237 (+)
G11674 NA non-coding downstream 867226 9968542 ~ 9968783 (+)
G11509 NA other upstream 875 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 11878 9068281 ~ 9089033 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 1622325 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 1798869 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 2076060 7022147 ~ 7024851 (+)
G11545 NA other downstream 122096 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 458148 9559464 ~ 9591649 (+)
G11660 NA other downstream 497499 9598815 ~ 9599156 (+)
AMCG00016174 NA other downstream 1742811 10844127 ~ 10958032 (+)
G11921 NA other downstream 2767509 11868825 ~ 11871735 (+)

Expression


Co-expression Network