G11660


Basic Information

Item Value
gene id G11660
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9598815 ~ 9599156 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14432
aaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaaccagcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccatgtggtccgatccaacagacgagctactgtatctcaaattgctgaaaaattgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14432 True 342 TUCP 0.54 1 9598815 9599156

Neighbor

gene id symbol gene type direction distance location
AMCG00016158 NA coding upstream 48599 9532102 ~ 9550216 (+)
AMCG00016157 katnal1,LOC107578067,LOC107697436,LOC107741157 coding upstream 76860 9510024 ~ 9521955 (+)
AMCG00016156 hmgb1,LOC105901051,LOC103353583 coding upstream 100023 9494462 ~ 9498792 (+)
AMCG00016145 NA coding upstream 192773 9396602 ~ 9406042 (+)
AMCG00016143 NA coding upstream 311940 9237700 ~ 9286875 (+)
AMCG00016160 NA coding downstream 58434 9657590 ~ 9658570 (+)
AMCG00016163 NA coding downstream 125433 9724589 ~ 9741418 (+)
AMCG00016168 NA coding downstream 192158 9791314 ~ 9797697 (+)
AMCG00016170 NA coding downstream 213659 9812815 ~ 9813758 (+)
AMCG00016175 NA coding downstream 1235173 10834329 ~ 10842459 (+)
G11572 NA non-coding upstream 264956 9330891 ~ 9333859 (+)
G11570 NA non-coding upstream 284381 9313998 ~ 9314434 (+)
G11511 NA non-coding upstream 494633 9103625 ~ 9104182 (+)
G11510 NA non-coding upstream 497499 9100911 ~ 9101316 (+)
G11508 NA non-coding upstream 500888 9097269 ~ 9097927 (+)
G11672 NA non-coding downstream 364808 9963964 ~ 9964237 (+)
G11674 NA non-coding downstream 369386 9968542 ~ 9968783 (+)
G11678 NA non-coding downstream 409883 10009039 ~ 10009385 (+)
G11681 NA non-coding downstream 498542 10097698 ~ 10098122 (+)
G11684 NA non-coding downstream 536772 10135928 ~ 10136190 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 7166 9559464 ~ 9591649 (+)
G11545 NA other upstream 372570 9223412 ~ 9226245 (+)
G11509 NA other upstream 498779 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 509782 9068281 ~ 9089033 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 2120229 7446450 ~ 7478586 (+)
AMCG00016174 NA other downstream 1244971 10844127 ~ 10958032 (+)
G11921 NA other downstream 2269669 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 2393816 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 2835980 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 3179068 12778224 ~ 12786899 (+)

Expression


Co-expression Network