G11672


Basic Information

Item Value
gene id G11672
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9963964 ~ 9964237 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14444
cattatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtctgagtatttcacaatctgctcagttactgggattttcacacaCAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14444 True 218 lncRNA 0.43 2 9963964 9964237

Neighbor

gene id symbol gene type direction distance location
AMCG00016170 NA coding upstream 150206 9812815 ~ 9813758 (+)
AMCG00016168 NA coding upstream 166267 9791314 ~ 9797697 (+)
AMCG00016163 NA coding upstream 222546 9724589 ~ 9741418 (+)
AMCG00016160 NA coding upstream 305394 9657590 ~ 9658570 (+)
AMCG00016158 NA coding upstream 413748 9532102 ~ 9550216 (+)
AMCG00016175 NA coding downstream 870092 10834329 ~ 10842459 (+)
AMCG00016181 NA coding downstream 1286910 11251147 ~ 11252118 (+)
AMCG00016182 NA coding downstream 1405125 11369362 ~ 11370140 (+)
AMCG00016180 NA coding downstream 1425572 11389809 ~ 11390312 (+)
AMCG00016184 NA coding downstream 1551519 11515756 ~ 11530359 (+)
G11572 NA non-coding upstream 630105 9330891 ~ 9333859 (+)
G11570 NA non-coding upstream 649530 9313998 ~ 9314434 (+)
G11511 NA non-coding upstream 859782 9103625 ~ 9104182 (+)
G11510 NA non-coding upstream 862648 9100911 ~ 9101316 (+)
G11508 NA non-coding upstream 866037 9097269 ~ 9097927 (+)
G11674 NA non-coding downstream 4305 9968542 ~ 9968783 (+)
G11678 NA non-coding downstream 44802 10009039 ~ 10009385 (+)
G11681 NA non-coding downstream 133461 10097698 ~ 10098122 (+)
G11684 NA non-coding downstream 171691 10135928 ~ 10136190 (+)
G11695 NA non-coding downstream 329134 10293371 ~ 10293596 (+)
G11660 NA other upstream 364808 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 372315 9559464 ~ 9591649 (+)
G11545 NA other upstream 737719 9223412 ~ 9226245 (+)
G11509 NA other upstream 863928 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 874931 9068281 ~ 9089033 (+)
AMCG00016174 NA other downstream 879890 10844127 ~ 10958032 (+)
G11921 NA other downstream 1904588 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 2028735 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 2470899 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 2813987 12778224 ~ 12786899 (+)

Expression


Co-expression Network