G11677


Basic Information

Item Value
gene id G11677
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9990607 ~ 9991140 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14449
ATGTAgcatcaaatcttgggtgagaacctccttccctcagccagggcattgaaaatgggtcgtggatgggtattccagcatgacaataacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccacagaaaatctgtggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaggatctgctaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaaaattatagactgatcatttctttgtcagtggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14449 True 513 lncRNA 0.44 2 9990607 9991140

Neighbor

gene id symbol gene type direction distance location
AMCG00016171 NA coding downstream 70833 9904963 ~ 9919774 (-)
AMCG00016172 NA coding downstream 85665 9904043 ~ 9904942 (-)
AMCG00016167 NA coding downstream 118182 9863271 ~ 9872425 (-)
AMCG00016169 NA coding downstream 156325 9833338 ~ 9834282 (-)
AMCG00016165 NA coding downstream 222685 9767215 ~ 9767922 (-)
AMCG00016173 NA coding upstream 84315 10075455 ~ 10118219 (-)
AMCG00016178 NA coding upstream 1010600 11001740 ~ 11034263 (-)
AMCG00016177 NA coding upstream 1043126 11034266 ~ 11126738 (-)
AMCG00016179 NA coding upstream 1233316 11224456 ~ 11237516 (-)
AMCG00016185 NA coding upstream 1453215 11444355 ~ 11445310 (-)
G11675 NA non-coding downstream 21824 9968577 ~ 9968783 (-)
G11662 NA non-coding downstream 294553 9695773 ~ 9696054 (-)
G11658 NA non-coding downstream 395654 9589735 ~ 9594953 (-)
G11650 NA non-coding downstream 446864 9543508 ~ 9543743 (-)
G11633 hmgb1,LOC105901051,LOC103353583 non-coding downstream 491854 9435802 ~ 9498753 (-)
G11680 NA non-coding upstream 23060 10014200 ~ 10014451 (-)
G11688 NA non-coding upstream 246355 10237495 ~ 10237800 (-)
G11699 NA non-coding upstream 337579 10328719 ~ 10329089 (-)
G11700 LOC100846954,LOC107575789 non-coding upstream 338006 10329146 ~ 10329591 (-)
G11701 NA non-coding upstream 338502 10329642 ~ 10329937 (-)
AMCG00016134 NA other downstream 1162847 8823545 ~ 8827760 (-)
G11326 NA other downstream 1796175 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 1866574 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 2237170 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 5060707 4903856 ~ 4929900 (-)
AMCG00016176 NA other upstream 843272 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 1775012 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 1841288 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 2332021 12323161 ~ 12329033 (-)
AMCG00016226 NA other upstream 2858738 12849878 ~ 12870560 (-)

Expression


Co-expression Network