G11684


Basic Information

Item Value
gene id G11684
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 10135928 ~ 10136190 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14456
aactcgtgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacgtgcccattgtaggtgctttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctatgcagccccatacgcaacaaactgtgatgcactgtgtgttctgacacctttctatcagaaccagcattaactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14456 True 263 lncRNA 0.43 1 10135928 10136190

Neighbor

gene id symbol gene type direction distance location
AMCG00016170 NA coding upstream 322170 9812815 ~ 9813758 (+)
AMCG00016168 NA coding upstream 338231 9791314 ~ 9797697 (+)
AMCG00016163 NA coding upstream 394510 9724589 ~ 9741418 (+)
AMCG00016160 NA coding upstream 477358 9657590 ~ 9658570 (+)
AMCG00016158 NA coding upstream 585712 9532102 ~ 9550216 (+)
AMCG00016175 NA coding downstream 698139 10834329 ~ 10842459 (+)
AMCG00016181 NA coding downstream 1114957 11251147 ~ 11252118 (+)
AMCG00016182 NA coding downstream 1233172 11369362 ~ 11370140 (+)
AMCG00016180 NA coding downstream 1253619 11389809 ~ 11390312 (+)
AMCG00016184 NA coding downstream 1379566 11515756 ~ 11530359 (+)
G11681 NA non-coding upstream 37806 10097698 ~ 10098122 (+)
G11678 NA non-coding upstream 126543 10009039 ~ 10009385 (+)
G11674 NA non-coding upstream 167145 9968542 ~ 9968783 (+)
G11672 NA non-coding upstream 171691 9963964 ~ 9964237 (+)
G11572 NA non-coding upstream 802069 9330891 ~ 9333859 (+)
G11695 NA non-coding downstream 157181 10293371 ~ 10293596 (+)
G11710 NA non-coding downstream 334311 10470501 ~ 10470778 (+)
G11723 NA non-coding downstream 516201 10652391 ~ 10652644 (+)
G11725 NA non-coding downstream 530505 10666695 ~ 10667044 (+)
G11726 NA non-coding downstream 531014 10667204 ~ 10667506 (+)
G11660 NA other upstream 536772 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 544279 9559464 ~ 9591649 (+)
G11545 NA other upstream 909683 9223412 ~ 9226245 (+)
G11509 NA other upstream 1035892 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 1046895 9068281 ~ 9089033 (+)
AMCG00016174 NA other downstream 707937 10844127 ~ 10958032 (+)
G11921 NA other downstream 1732635 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 1856782 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 2298946 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 2642034 12778224 ~ 12786899 (+)

Expression


Co-expression Network