G11742


Basic Information

Item Value
gene id G11742
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 10845821 ~ 10846045 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14517
TTCGCATTTTGAAGCTCAAATTTAAGGTAATTTATAATTCTGCTAAAGCACATCTCAGTCTGATGGTGTTGTGTCTTGCAACATATTTTAGTTCCCAATCATTGACGGCTCTCTTCTTTCCCTCCAGCAGGAGACTGACACCAAGCATTTCTGACACTAAGCCCCTTCTCCTGCAGTAATAAAGTTAAGctctgtatttgtgtatagTTGCACATTATTCTATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14517 True 225 lncRNA 0.39 1 10845821 10846045

Neighbor

gene id symbol gene type direction distance location
AMCG00016175 NA coding upstream 3362 10834329 ~ 10842459 (+)
AMCG00016170 NA coding upstream 1032063 9812815 ~ 9813758 (+)
AMCG00016168 NA coding upstream 1048124 9791314 ~ 9797697 (+)
AMCG00016163 NA coding upstream 1104403 9724589 ~ 9741418 (+)
AMCG00016160 NA coding upstream 1187251 9657590 ~ 9658570 (+)
AMCG00016181 NA coding downstream 405102 11251147 ~ 11252118 (+)
AMCG00016182 NA coding downstream 523317 11369362 ~ 11370140 (+)
AMCG00016180 NA coding downstream 543764 11389809 ~ 11390312 (+)
AMCG00016184 NA coding downstream 669711 11515756 ~ 11530359 (+)
AMCG00016186 NA coding downstream 781648 11627693 ~ 11643410 (+)
G11726 NA non-coding upstream 178315 10667204 ~ 10667506 (+)
G11725 NA non-coding upstream 178777 10666695 ~ 10667044 (+)
G11723 NA non-coding upstream 193177 10652391 ~ 10652644 (+)
G11710 NA non-coding upstream 375043 10470501 ~ 10470778 (+)
G11695 NA non-coding upstream 552225 10293371 ~ 10293596 (+)
G11761 NA non-coding downstream 155405 11001450 ~ 11002646 (+)
G11774 NA non-coding downstream 298448 11144493 ~ 11144705 (+)
G11778 NA non-coding downstream 340347 11186392 ~ 11188082 (+)
G11792 NA non-coding downstream 391313 11237358 ~ 11240804 (+)
G11798 NA non-coding downstream 462073 11308118 ~ 11308357 (+)
G11660 NA other upstream 1246665 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 1254172 9559464 ~ 9591649 (+)
G11545 NA other upstream 1619576 9223412 ~ 9226245 (+)
G11509 NA other upstream 1745785 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 1756788 9068281 ~ 9089033 (+)
G11921 NA other downstream 1022780 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 1146927 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 1589091 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 1932179 12778224 ~ 12786899 (+)
AMCG00016241 NA other downstream 2425539 13271584 ~ 13389636 (+)

Expression


Co-expression Network