Gene
RNA
| Item | Value |
|---|---|
| gene id | G11792 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 11237358 ~ 11240804 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060113 | inner ear receptor cell differentiation | biological_process |
| GO:0035315 | hair cell differentiation | biological_process |
| GO:0042490 | mechanoreceptor differentiation | biological_process |
| GO:0042491 | inner ear auditory receptor cell differentiation | biological_process |
| GO:0009913 | epidermal cell differentiation | biological_process |
| GO:0060563 | neuroepithelial cell differentiation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14573 | True | 310 | lncRNA | 0.35 | 2 | 11237358 | 11240804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016175 | NA | coding | upstream | 394899 | 10834329 ~ 10842459 (+) |
| AMCG00016170 | NA | coding | upstream | 1423600 | 9812815 ~ 9813758 (+) |
| AMCG00016168 | NA | coding | upstream | 1439661 | 9791314 ~ 9797697 (+) |
| AMCG00016163 | NA | coding | upstream | 1495940 | 9724589 ~ 9741418 (+) |
| AMCG00016160 | NA | coding | upstream | 1578788 | 9657590 ~ 9658570 (+) |
| AMCG00016181 | NA | coding | downstream | 10343 | 11251147 ~ 11252118 (+) |
| AMCG00016182 | NA | coding | downstream | 128558 | 11369362 ~ 11370140 (+) |
| AMCG00016180 | NA | coding | downstream | 149005 | 11389809 ~ 11390312 (+) |
| AMCG00016184 | NA | coding | downstream | 274952 | 11515756 ~ 11530359 (+) |
| AMCG00016186 | NA | coding | downstream | 386889 | 11627693 ~ 11643410 (+) |
| G11778 | NA | non-coding | upstream | 49276 | 11186392 ~ 11188082 (+) |
| G11774 | NA | non-coding | upstream | 92653 | 11144493 ~ 11144705 (+) |
| G11761 | NA | non-coding | upstream | 234712 | 11001450 ~ 11002646 (+) |
| G11742 | NA | non-coding | upstream | 391313 | 10845821 ~ 10846045 (+) |
| G11726 | NA | non-coding | upstream | 569852 | 10667204 ~ 10667506 (+) |
| G11798 | NA | non-coding | downstream | 67314 | 11308118 ~ 11308357 (+) |
| G11813 | NA | non-coding | downstream | 242758 | 11483562 ~ 11483793 (+) |
| G11846 | NA | non-coding | downstream | 477279 | 11718083 ~ 11719651 (+) |
| G11847 | NA | non-coding | downstream | 478975 | 11719779 ~ 11720408 (+) |
| G11848 | NA | non-coding | downstream | 481264 | 11722068 ~ 11722558 (+) |
| AMCG00016174 | NA | other | upstream | 279326 | 10844127 ~ 10958032 (+) |
| G11660 | NA | other | upstream | 1638202 | 9598815 ~ 9599156 (+) |
| AMCG00016159 | ubl3,LOC107578048,LOC106604009 | other | upstream | 1645709 | 9559464 ~ 9591649 (+) |
| G11545 | NA | other | upstream | 2011113 | 9223412 ~ 9226245 (+) |
| G11509 | NA | other | upstream | 2137322 | 9099420 ~ 9100036 (+) |
| G11921 | NA | other | downstream | 628021 | 11868825 ~ 11871735 (+) |
| AMCG00016202 | NA | other | downstream | 752168 | 11992972 ~ 12005952 (+) |
| AMCG00016213 | NA | other | downstream | 1194332 | 12435136 ~ 12461265 (+) |
| AMCG00016221 | NA | other | downstream | 1537420 | 12778224 ~ 12786899 (+) |
| AMCG00016241 | NA | other | downstream | 2030780 | 13271584 ~ 13389636 (+) |
