G11921


Basic Information

Item Value
gene id G11921
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 11868825 ~ 11871735 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14724
ttattacctcagcagttgtgtagttttatcAACATCACTCTCTATTTTACGagtccattaaaaaaatgagaaaatcaACATCTTTAGCAAAACAAGGGATGCAAATGTGTTATCTGTGTTTAACTCGGTAAGATCTATATCACTTTATACATCCTACTGTTtacaaacatattattatttatatataaaaaaaacaaaacctgaataggtgttttacatttattaaaaaaggtCCTCCACATGTAGTACAAATAAGGTCAGTGCCAATTGTTCTGTCCCAACGCTTCTGTCTTTATTGGCTCAAAAAGGTATGTTGACATTATGTTATCAAATAAACGCACTAAACAAGCAAGaatgtttggttttaaaaatatatttttactagTTCCATTTTTTCTGTTAGTACACACAAGTCATAATTGCACCTGTACACCAAACTGGcattataaaaatactttatatcTGTGTATCACTTTTATATAGACTACTACTCTTGTACTCTCTACCCAGCAACTTccaaaaatgcacacacacgcacacaccttCCATTCCAACATATGAAAAGAGTTTATATTTgaggttttaaaaacagacattatgTCCATTATAATAGAGAACTGTATTTTGTTCTCCAATACAATGTTACTGAGATTAACCCAGTGCCAGCATACGCTAGAAACCtgacaaaattacatttaacaatttgACCAAGTATAATTTCTTGGATTCATTGCAGCACAGTGAACTCTATTAATGAGTAGATACAATATTTGATACAGCCTTAATAACTAAAtggtgttttataaatatattttaaaatgtccataTCCAAATATGGGAAATGGTTTGATGCCAGCATAGATAGGAGCATAGGAGATAGGAAAAAACTGAACATGataaacataaacaagaaaaaaaaatgcaatcttcTATGTTGTATCGGAATATAGGAGAAGAACGTATTctacataaaataacagaaaacccTGTATTGTATTCGCTTAATACAGCCTATATaggttaaatgtttttgtagtcAGCCATGGCAAATTCCTAAAACATGTTCACTTCCTGGGCTTTTGTACTTAacgtattaaaaaataatacacacacaacttcaTAACATCAACTCACAGGCAGAATACAGCCAGTCAGAAAAAGTGAACTTATTGAGGTTCTTTTCTGCAGATGTTGCTCGTCTCCAACTCTGTGGCAGACTGAACAGGTCCTAACACCAAACGCAGGAACAGTGTAACACCAGTGTGCGCGCAGTCTCCTCTATGGTGCGGCTCCTTGCAGAGGCCCACAGTTAAGCCGTCTGCACGCCGTCCTCGCCACACTCGGACTGCAGCAGGATCTTGGCATTGCCCTCGTTGTCCTCGGCGTGCTTGTCCAAGTCGTCCAGGGGCTTGTACCGTCTCCTGTACAGCATCCTGGTGACCAGCGTGACGATGAACATCTCCATAATTAACAGCTGCTGGTTCATGACTGAGGAAAGAGCAGACCACAGTCACTCCCTCAGACTTTCACACCACTTtaaggagtcaccctcgatcctgtgctctcctacacccagcacatcaccacgctgacatgcagatttttcctgagcaacatatgccggatccgtcccttcctcaccgactgcTCGATTCAGCTGcccgtccagtcactggtcctcttccgcctggactactgcaactccctcctgtccaacctgcctgcaactactacccgccgctccagctcatccagaactctgcggctcgtctggtattctctctgccacggttcgcacacgctactccactgctccgctccctccactggctcccgataccggcacgcattcagttcaagacattgaccctcacctaccgctgtctcaaccacactgcaccaagctaccttcagacactcgtctctccatacatcccctccagaccactgcgctcctccagagccagaagactaactctacctcctctccactctccagagccgctccttctcatcccaggcccctaagtggtggaaagcccttcccactgaagtcaaaacagcagagtccttgacctccttctggcgcttactcaagacacatgttttcagacagtacttgtaatttagtctttcattatcctgtaagattgcacttatacaatgttttgtcatactcttgcctttgcattaatagcacttgtattgtttattttgatttcccctactCTCCCTCTGccttagttcttaactttgacttaacatcatgtctgcacttatcagctctTACAGTCTAGAATACACTTGTAAAAaggtattatgcctgaactgcactgtattattgtattgtattgtattagtgcactttgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14724 True 2371 TUCP 0.41 2 11868825 11871735

Neighbor

gene id symbol gene type direction distance location
AMCG00016197 pcyt1b,LOC107590340,LOC107721854 coding upstream 20961 11837672 ~ 11847864 (+)
AMCG00016196 NA coding upstream 68029 11796688 ~ 11800796 (+)
AMCG00016198 NA coding upstream 77193 11782180 ~ 11791632 (+)
AMCG00016191 NA coding upstream 104178 11751518 ~ 11764647 (+)
AMCG00016192 rrm1,LOC107684690,LOC106920178,LOC103364515,LOC103136300 coding upstream 119454 11741483 ~ 11749371 (+)
AMCG00016205 NA coding downstream 184965 12056700 ~ 12109384 (+)
AMCG00016206 NA coding downstream 301333 12173068 ~ 12205659 (+)
AMCG00016207 NA coding downstream 369908 12241643 ~ 12261142 (+)
AMCG00016215 NA coding downstream 514243 12385978 ~ 12397053 (+)
AMCG00016214 NA coding downstream 529094 12400829 ~ 12407292 (+)
G11914 NA non-coding upstream 17204 11848285 ~ 11851621 (+)
G11905 NA non-coding upstream 49760 11817004 ~ 11819065 (+)
G11851 NA non-coding upstream 138599 11729600 ~ 11730226 (+)
G11850 sc6a7 non-coding upstream 141402 11726942 ~ 11727423 (+)
G11849 NA non-coding upstream 145224 11723197 ~ 11723601 (+)
G11953 NA non-coding downstream 156564 12028299 ~ 12029121 (+)
G11988 NA non-coding downstream 334613 12206348 ~ 12207474 (+)
G12009 NA non-coding downstream 390316 12262051 ~ 12265709 (+)
G12032 NA non-coding downstream 451442 12323177 ~ 12328393 (+)
G12036 NA non-coding downstream 460401 12332136 ~ 12333112 (+)
AMCG00016174 NA other upstream 910793 10844127 ~ 10958032 (+)
G11660 NA other upstream 2269669 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 2277176 9559464 ~ 9591649 (+)
G11545 NA other upstream 2642580 9223412 ~ 9226245 (+)
G11509 NA other upstream 2768789 9099420 ~ 9100036 (+)
AMCG00016202 NA other downstream 121237 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 563401 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 906489 12778224 ~ 12786899 (+)
AMCG00016241 NA other downstream 1399849 13271584 ~ 13389636 (+)
G12348 NA other downstream 1750144 13621879 ~ 13627711 (+)

Expression


Co-expression Network