G12036


Basic Information

Item Value
gene id G12036
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 12332136 ~ 12333112 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14859
gtgAGGAGAATGAGGACCTCAAGGTCTGTCCCCTTACCATGGGTCTTCAGCTTGTCTGTCATCTTGTTGATCTTGCGCTCCAGCCGCGCGTACCGAGCAAATTCATCCATCATGCTGATGGTGGCCAGTTCCTGCTTCATGTCTTGTATCTCCATTCTCATCTGGGTCTCCTGCTCTGCATCTTTCTGAAGGACTTTCGACAGCTACAAGGGATCGGGAATAGGGAGCGAAAGGGTTGCTCACTCGCAGTGGTGAACCGGATCTAGCCCCCATTTGCTCACGTGTACCACAGATTAGTGATGTTATATAATGGCAGCACTACTGTTTTCTACAACTAAGAACCTAGTAATATGTTTCTATAATAGGACCTCTAGAAGCGATTCATTAAGTTGTGGCACAACATCATATAGTTGATAGCTGAGGAACTACTCTTAGCCTCACAATATGGACtaatatctatatttaaagACAGCTCTGCTATTGCTCCCTAACATCCCATAATGCAAAGCTGAGCTAGGCCATCCATTTGCTGCTTCAAAATACTGCAGTTGCCTGACCAAATTGATTCTGGTGTTGATTGATGGGTCAGGTATGTGTTTTAATACTGCAGCTTTAAGATATTTGTGGTGGAGTTTTGCCCTTGTAAGTAAAGAAGTCTGTAAGATTGCAAACTTTGTAAATTGCAAAACTATTTCGAAAGTTGTACGTCATGTCACAGAAATAATGAGAAGTCTGCTTGTTATCGTACCAGGTGCAGCAGCATGCTTCTGAGAACGTAAGTAAGTTGGCTTACTAGGAAGAAGTTCTACACATGATAATCAGTGATGCAGTAATGCTATGCGCACAGAAATAGAGAATGTGTGTAATGAACTGAAGCATAATACGCAGATGGTGACTATATCATTACATTACGATCATATTGAGTTTTTGTGTATATTGGTGAATCTTACAACATATACACCGGCCTTTTGTTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14859 True 977 lncRNA 0.42 1 12332136 12333112

Neighbor

gene id symbol gene type direction distance location
AMCG00016207 NA coding upstream 70994 12241643 ~ 12261142 (+)
AMCG00016206 NA coding upstream 126477 12173068 ~ 12205659 (+)
AMCG00016205 NA coding upstream 222752 12056700 ~ 12109384 (+)
AMCG00016197 pcyt1b,LOC107590340,LOC107721854 coding upstream 484272 11837672 ~ 11847864 (+)
AMCG00016196 NA coding upstream 531340 11796688 ~ 11800796 (+)
AMCG00016215 NA coding downstream 52866 12385978 ~ 12397053 (+)
AMCG00016214 NA coding downstream 67717 12400829 ~ 12407292 (+)
AMCG00016218 NA coding downstream 333071 12666183 ~ 12679044 (+)
AMCG00016220 NA coding downstream 349160 12682272 ~ 12691799 (+)
AMCG00016229 NA coding downstream 552514 12885626 ~ 12890771 (+)
G12032 NA non-coding upstream 3743 12323177 ~ 12328393 (+)
G12009 NA non-coding upstream 66427 12262051 ~ 12265709 (+)
G11988 NA non-coding upstream 124662 12206348 ~ 12207474 (+)
G11953 NA non-coding upstream 303015 12028299 ~ 12029121 (+)
G11914 NA non-coding upstream 480515 11848285 ~ 11851621 (+)
G12042 NA non-coding downstream 21563 12354675 ~ 12355369 (+)
G12043 NA non-coding downstream 41636 12374748 ~ 12375109 (+)
G12183 NA non-coding downstream 570240 12903352 ~ 12903574 (+)
G12209 serpinh1b,LOC106613072,LOC107666206,LOC107588392,LOC107756564,LOC106581278 non-coding downstream 645166 12978278 ~ 12979516 (+)
G12214 NA non-coding downstream 709130 13042242 ~ 13100583 (+)
AMCG00016202 NA other upstream 326184 11992972 ~ 12005952 (+)
G11921 NA other upstream 460401 11868825 ~ 11871735 (+)
AMCG00016174 NA other upstream 1374104 10844127 ~ 10958032 (+)
G11660 NA other upstream 2732980 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 2740487 9559464 ~ 9591649 (+)
AMCG00016213 NA other downstream 102024 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 445112 12778224 ~ 12786899 (+)
AMCG00016241 NA other downstream 938472 13271584 ~ 13389636 (+)
G12348 NA other downstream 1288767 13621879 ~ 13627711 (+)
G12349 NA other downstream 1298173 13631285 ~ 13631797 (+)

Expression


Co-expression Network