G12043


Basic Information

Item Value
gene id G12043
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 12374748 ~ 12375109 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU14866
AGATATTTCATGCCTGCTCTGGACTCCCTCTGCTGTTCAAAAGGAGCTACTTCTCATACAGTAGGTTACAATCAGCTTCACTTCAATAATCttgaacaaaaagacaaaacaggGTGTAGGGTGTGTTgttgtggatgtgtgtgtctgtagggtGAAGCCTCACTCACATCCTTTGCTTGAGAAGATCGTGCTCTATTTGAAGACGCTTCTTGACTTCTTGGGCTTCGCGTGTCTTCCGGCTTTGTGACGCAATCTGACGCTTGAACGGAGCTTTGCTGAGCTTCAAGTTCTTCTCTAAGTCCCGAGATAGCATTTACAGACTATAGATGGTTTATGCTTATTTCAATGCAAGTGGTTCTAAG

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03430 Mismatch repair

RNA

RNA id representative length rna type GC content exon number start site end site
TU14866 True 362 lncRNA 0.34 1 12374748 12375109

Neighbor

gene id symbol gene type direction distance location
AMCG00016207 NA coding upstream 113606 12241643 ~ 12261142 (+)
AMCG00016206 NA coding upstream 169089 12173068 ~ 12205659 (+)
AMCG00016205 NA coding upstream 265364 12056700 ~ 12109384 (+)
AMCG00016197 pcyt1b,LOC107590340,LOC107721854 coding upstream 526884 11837672 ~ 11847864 (+)
AMCG00016196 NA coding upstream 573952 11796688 ~ 11800796 (+)
AMCG00016215 NA coding downstream 10869 12385978 ~ 12397053 (+)
AMCG00016214 NA coding downstream 25720 12400829 ~ 12407292 (+)
AMCG00016218 NA coding downstream 291074 12666183 ~ 12679044 (+)
AMCG00016220 NA coding downstream 307163 12682272 ~ 12691799 (+)
AMCG00016229 NA coding downstream 510517 12885626 ~ 12890771 (+)
G12042 NA non-coding upstream 19379 12354675 ~ 12355369 (+)
G12036 NA non-coding upstream 41636 12332136 ~ 12333112 (+)
G12032 NA non-coding upstream 46355 12323177 ~ 12328393 (+)
G12009 NA non-coding upstream 109039 12262051 ~ 12265709 (+)
G11988 NA non-coding upstream 167274 12206348 ~ 12207474 (+)
G12183 NA non-coding downstream 528243 12903352 ~ 12903574 (+)
G12209 serpinh1b,LOC106613072,LOC107666206,LOC107588392,LOC107756564,LOC106581278 non-coding downstream 603169 12978278 ~ 12979516 (+)
G12214 NA non-coding downstream 667133 13042242 ~ 13100583 (+)
G12217 NA non-coding downstream 690110 13065219 ~ 13065938 (+)
G12220 NA non-coding downstream 696462 13071571 ~ 13073752 (+)
AMCG00016202 NA other upstream 368796 11992972 ~ 12005952 (+)
G11921 NA other upstream 503013 11868825 ~ 11871735 (+)
AMCG00016174 NA other upstream 1416716 10844127 ~ 10958032 (+)
G11660 NA other upstream 2775592 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 2783099 9559464 ~ 9591649 (+)
AMCG00016213 NA other downstream 60027 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 403115 12778224 ~ 12786899 (+)
AMCG00016241 NA other downstream 896475 13271584 ~ 13389636 (+)
G12348 NA other downstream 1246770 13621879 ~ 13627711 (+)
G12349 NA other downstream 1256176 13631285 ~ 13631797 (+)

Expression


Co-expression Network