Gene
RNA
| Item | Value |
|---|---|
| gene id | G12217 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 13065219 ~ 13065938 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU15087 | True | 681 | lncRNA | 0.38 | 2 | 13065219 | 13065938 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016231 | NA | coding | upstream | 1711 | 13037182 ~ 13063508 (+) |
| AMCG00016237 | NA | coding | upstream | 44018 | 13020983 ~ 13021201 (+) |
| AMCG00016230 | NA | coding | upstream | 91672 | 12960048 ~ 12973547 (+) |
| AMCG00016229 | NA | coding | upstream | 174448 | 12885626 ~ 12890771 (+) |
| AMCG00016220 | NA | coding | upstream | 373420 | 12682272 ~ 12691799 (+) |
| AMCG00016240 | NA | coding | downstream | 119096 | 13185034 ~ 13188393 (+) |
| AMCG00016239 | usp25,LOC107653727 | coding | downstream | 146120 | 13212058 ~ 13247016 (+) |
| AMCG00016242 | NA | coding | downstream | 379100 | 13445038 ~ 13455916 (+) |
| AMCG00016249 | atg101,LOC107751375,LOC107686213,LOC107589731 | coding | downstream | 517106 | 13583044 ~ 13588973 (+) |
| AMCG00016250 | NA | coding | downstream | 531896 | 13597834 ~ 13617644 (+) |
| G12209 | serpinh1b,LOC106613072,LOC107666206,LOC107588392,LOC107756564,LOC106581278 | non-coding | upstream | 85703 | 12978278 ~ 12979516 (+) |
| G12183 | NA | non-coding | upstream | 161645 | 12903352 ~ 12903574 (+) |
| G12043 | NA | non-coding | upstream | 690110 | 12374748 ~ 12375109 (+) |
| G12042 | NA | non-coding | upstream | 709850 | 12354675 ~ 12355369 (+) |
| G12036 | NA | non-coding | upstream | 732107 | 12332136 ~ 12333112 (+) |
| G12220 | NA | non-coding | downstream | 5633 | 13071571 ~ 13073752 (+) |
| G12289 | NA | non-coding | downstream | 407550 | 13473488 ~ 13473785 (+) |
| G12330 | NA | non-coding | downstream | 480461 | 13546399 ~ 13546598 (+) |
| G12331 | NA | non-coding | downstream | 485656 | 13551594 ~ 13551858 (+) |
| G12347 | NA | non-coding | downstream | 572364 | 13638302 ~ 13639588 (+) |
| AMCG00016221 | NA | other | upstream | 278320 | 12778224 ~ 12786899 (+) |
| AMCG00016213 | NA | other | upstream | 603954 | 12435136 ~ 12461265 (+) |
| AMCG00016202 | NA | other | upstream | 1059267 | 11992972 ~ 12005952 (+) |
| G11921 | NA | other | upstream | 1193484 | 11868825 ~ 11871735 (+) |
| AMCG00016174 | NA | other | upstream | 2107187 | 10844127 ~ 10958032 (+) |
| AMCG00016241 | NA | other | downstream | 205646 | 13271584 ~ 13389636 (+) |
| G12348 | NA | other | downstream | 555941 | 13621879 ~ 13627711 (+) |
| G12349 | NA | other | downstream | 565347 | 13631285 ~ 13631797 (+) |
| G12351 | NA | other | downstream | 569504 | 13635442 ~ 13637001 (+) |
| G12587 | NA | other | downstream | 1371833 | 14437771 ~ 14438606 (+) |
